RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SLC1A4P43007 532 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 ANTXR2P58335 489 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 GRB14Q14449 540 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
SNF8-206ENST00000509989 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 GMCL1Q96IK5 515 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 NUDT12Q9BQG2 462 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
SNF8-206ENST00000509989 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
SNF8-206ENST00000509989 PDHBP11177 359 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 STAT3P40763 770 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 CCNA1P78396 465 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 SEC23AQ15436 765 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
SNF8-206ENST00000509989 MB21D1Q8N884 522 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 PRPF38AQ8NAV1 312 aaKnown RBP15.98■□□□□ 0.15
SNF8-206ENST00000509989 PXYLP1Q8TE99 480 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 ZSCAN10Q96SZ4 725 aaPredicted RBP15.98■□□□□ 0.15
SNF8-206ENST00000509989 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 PRR12Q9ULL5 1215 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 SYNPO2Q9UMS6 1093 aa15.98■□□□□ 0.15
SNF8-206ENST00000509989 MKI67P46013 3256 aaKnown RBP15.98■□□□□ 0.15
SNF8-206ENST00000509989 TNKSO95271 1327 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 SLC15A5A6NIM6 579 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 SLC27A2O14975 620 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 CDC45O75419 566 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 PGK2P07205 417 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 PCP11498 1178 aaKnown RBP15.97■□□□□ 0.15
SNF8-206ENST00000509989 ADORA2AP29274 412 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
SNF8-206ENST00000509989 CCDC174Q6PII3 467 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 RIOX2Q8IUF8 465 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 SHCBP1Q8NEM2 672 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 AGBL1Q96MI9 1066 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 ANO2Q9NQ90 1003 aa15.97■□□□□ 0.15
SNF8-206ENST00000509989 IGHA2P01877 340 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
SNF8-206ENST00000509989 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
SNF8-206ENST00000509989 TRPV1Q8NER1 839 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 ANKS1AQ92625 1134 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 KRT23Q9C075 422 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 RNF208Q9H0X6 261 aa15.96■□□□□ 0.15
SNF8-206ENST00000509989 CWC22Q9HCG8 908 aaKnown RBP15.96■□□□□ 0.15
SNF8-206ENST00000509989 ALPK3Q96L96 1907 aa15.96■□□□□ 0.14
SNF8-206ENST00000509989 HMGCRP04035 888 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 CYP2C19P33261 490 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 RGS2P41220 211 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 STAT2P52630 851 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
SNF8-206ENST00000509989 ZNF543Q08ER8 600 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 IKQ13123 557 aaPredicted RBP15.95■□□□□ 0.14
SNF8-206ENST00000509989 SLC35G1Q2M3R5 365 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 RASEFQ8IZ41 740 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 PNMA1Q8ND90 353 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 SOCS4Q8WXH5 440 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 TTC14Q96N46 770 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 APBA2Q99767 749 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 UBA5Q9GZZ9 404 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
SNF8-206ENST00000509989 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
SNF8-206ENST00000509989 PDE4DIPQ5VU43 2346 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 ZBED4O75132 1171 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 XRCC5P13010 732 aaKnown RBP15.94■□□□□ 0.14
SNF8-206ENST00000509989 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
SNF8-206ENST00000509989 MUM1L1Q5H9M0 696 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 BTNL9Q6UXG8 535 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 KIAA1211Q6ZU35 1233 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 STAG2Q8N3U4 1231 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 DEFB118Q96PH6 123 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 TMEM106CQ9BVX2 250 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 MROH8Q9H579 483 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 IVNS1ABPQ9Y6Y0 642 aa15.94■□□□□ 0.14
SNF8-206ENST00000509989 HOXC6P09630 235 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
SNF8-206ENST00000509989 UBXN2AP68543 259 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 SYDE2Q5VT97 1194 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 FAM160B2Q86V87 743 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 IQCA1Q86XH1 822 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 CHURC1Q8WUH1 139 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 FGD4Q96M96 766 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
SNF8-206ENST00000509989 MMP19Q99542 508 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 TEX13BQ9BXU2 312 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 LRRC2Q9BYS8 371 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNF8-206ENST00000509989 CNNM2Q9H8M5 875 aa15.93■□□□□ 0.14
SNF8-206ENST00000509989 PAK6Q9NQU5 681 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms