RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 HNRNPH2P55795 449 aaKnown RBP14.68□□□□□ -0.06
PTPN7-217ENST00000495688 SLC35G1Q2M3R5 365 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 BLIDQ8IZY5 108 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 CCDC51Q96ER9 411 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 ZNF652Q9Y2D9 606 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 LAMB2P55268 1798 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
PTPN7-217ENST00000495688 SCN7AQ01118 1682 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 TRAPPC10P48553 1259 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 TFAP4Q01664 338 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 CYP26C1Q6V0L0 522 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 RASSF8Q8NHQ8 419 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
PTPN7-217ENST00000495688 BEND6Q5SZJ8 279 aaPredicted RBP14.67□□□□□ -0.06
PTPN7-217ENST00000495688 TBC1D9BQ66K14 1250 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 CEP112Q8N8E3 955 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 NOA1Q8NC60 698 aaKnown RBP14.67□□□□□ -0.06
PTPN7-217ENST00000495688 NAPGQ99747 312 aaPredicted RBP14.67□□□□□ -0.06
PTPN7-217ENST00000495688 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 DISC1Q9NRI5 854 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 GUCA1BQ9UMX6 200 aa14.67□□□□□ -0.06
PTPN7-217ENST00000495688 USP17L3A6NCW0 530 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 USP17L4A6NCW7 530 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 ENC1O14682 589 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
PTPN7-217ENST00000495688 INF2Q27J81 1249 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 USP17L1Q7RTZ2 530 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 KAT14Q9H8E8 782 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 ABCB6Q9NP58 842 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 MAP2K7O14733 419 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 LONP1P36776 959 aaKnown RBP14.66□□□□□ -0.06
PTPN7-217ENST00000495688 VSNL1P62760 191 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 BRD3Q15059 726 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 LINC00116Q8NCU8 138 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 TRERF1Q96PN7 1200 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 ATP8A2Q9NTI2 1148 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 HDAC6Q9UBN7 1215 aa14.66□□□□□ -0.06
PTPN7-217ENST00000495688 N4BP1O75113 896 aaKnown RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 NDUFA10O95299 355 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 RPS8P62241 208 aaKnown RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 FAM193AP78312 1265 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 SPAG1Q07617 926 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 TAF3Q5VWG9 929 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 ARL6IP4Q66PJ3 421 aaKnown RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 SLC44A5Q8NCS7 719 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 ANKRD20A12PQ8NF67 263 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 PCDHA4Q9UN74 947 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 EPN1Q9Y6I3 576 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 SPATA31A1Q5TZJ5 1347 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 COL16A1Q07092 1604 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 CYTH3O43739 400 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
PTPN7-217ENST00000495688 ARPP21Q9UBL0 812 aaPredicted RBP14.65□□□□□ -0.06
PTPN7-217ENST00000495688 CASZ1Q86V15 1759 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 KIF5BP33176 963 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CLEC4GQ6UXB4 293 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 MB21D1Q8N884 522 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 RAB21Q9UL25 225 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 PCDHA6Q9UN73 950 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 PCDHA8Q9Y5H6 950 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CCDC194A0A1B0GVG4 234 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CTAGE15A4D2H0 777 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 M0R2N6 131 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 KLRC4O43908 158 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CALML3P27482 149 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 KLK7P49862 253 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 WDR59Q6PJI9 974 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CTAGE6Q86UF2 777 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 SRP68Q9UHB9 627 aaKnown RBP14.64□□□□□ -0.07
PTPN7-217ENST00000495688 MAD2L2Q9UI95 211 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 ADAM21Q9UKJ8 722 aa14.64□□□□□ -0.07
PTPN7-217ENST00000495688 H7C1D1 291 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 AMPD2Q01433 879 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 GRIK5Q16478 980 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 TRIM47Q96LD4 638 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 MYO6Q9UM54 1294 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 B4DLN1 442 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 SRGAP2O75044 1071 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 UBA7P41226 1012 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 USP5P45974 858 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 DIXDC1Q155Q3 683 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
PTPN7-217ENST00000495688 ZNF507Q8TCN5 953 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 PYM1Q9BRP8 204 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms