RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 ZNF384Q8TF68 577 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 SEC63Q9UGP8 760 aaKnown RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 A0A087WUV0 522 aaPredicted RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 PHLPP1O60346 1717 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 ZRANB2O95218 330 aaKnown RBP eCLIP13.85□□□□□ -0.19
USP11-206ENST00000469080 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 YEATS4O95619 227 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 UBA7P41226 1012 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 FANCCQ00597 558 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 VPS72Q15906 364 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 TBC1D22AQ8WUA7 517 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 VPS16Q9H269 839 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 MCM6Q14566 821 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 KCTD1Q719H9 257 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 DPF2Q92785 391 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 FUCA2Q9BTY2 467 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 JCADQ9P266 1359 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 ADAMTS3O15072 1205 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 PHACTR2O75167 634 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 ELF1P32519 619 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 TXKP42681 527 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 GRAPQ13588 217 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 CCDC178Q5BJE1 867 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 ZC3H12AQ5D1E8 599 aaKnown RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 FMNL3Q8IVF7 1028 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 USP40Q9NVE5 1235 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 LDHCP07864 332 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 THOC1Q96FV9 657 aaKnown RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 DESI2Q9BSY9 194 aa13.84□□□□□ -0.19
USP11-206ENST00000469080 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
USP11-206ENST00000469080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.19
USP11-206ENST00000469080 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 USH1GQ495M9 461 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 WDR66Q8TBY9 1149 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 ARFGAP3Q9NP61 516 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 POLR3EQ9NVU0 708 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 CMA1P23946 247 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 KIF5BP33176 963 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 LIFRP42702 1097 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 IRX1P78414 480 aaPredicted RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 POSTNQ15063 836 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 NTRK3Q16288 839 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 CCNT1O60563 726 aaKnown RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 GDF11O95390 407 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 DNA2P51530 1060 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 DYMQ7RTS9 669 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 CDK5RAP3Q96JB5 506 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.2
USP11-206ENST00000469080 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
USP11-206ENST00000469080 URI1O94763 535 aaPredicted RBP13.82□□□□□ -0.2
USP11-206ENST00000469080 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 FAXDC2Q96IV6 333 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 TBC1D7Q9P0N9 293 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 XDHP47989 1333 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 TXLNAP40222 546 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 STAT6P42226 847 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 CEP131Q9UPN4 1083 aa13.82□□□□□ -0.2
USP11-206ENST00000469080 PEX19P40855 299 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 TOB1P50616 345 aaPredicted RBP13.81□□□□□ -0.2
USP11-206ENST00000469080 NEDD9Q14511 834 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 C11orf91Q3C1V1 193 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
USP11-206ENST00000469080 PKD2L1Q9P0L9 805 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 AP1G2O75843 785 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 SCG2P13521 617 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 NLRP12P59046 1061 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 BARGINQ6ZT62 677 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 AGXT2Q9BYV1 514 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 LZTFL1Q9NQ48 299 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
USP11-206ENST00000469080 DNAI1Q9UI46 699 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 RTL9Q8NET4 1388 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 GYS1P13807 737 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 SHROOM1Q2M3G4 852 aaPredicted RBP13.81□□□□□ -0.2
USP11-206ENST00000469080 FBXO33Q7Z6M2 555 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
USP11-206ENST00000469080 KAT2BQ92831 832 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 PIGSQ96S52 555 aa13.81□□□□□ -0.2
USP11-206ENST00000469080 H3BQF6 201 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 RAD17O75943 681 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 GCKP35557 465 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms