RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
UBR4-211ENST00000467272 ELP1O95163 1332 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 ZNFX1Q9P2E3 1918 aaKnown RBP14.71□□□□□ -0.05
UBR4-211ENST00000467272 MYADML2A6NDP7 307 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 USP17L21D6R901 530 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
UBR4-211ENST00000467272 UBE3CQ15386 1083 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 HSP90AB4PQ58FF6 505 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 TJAP1Q5JTD0 557 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 MFSD5Q6N075 450 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 CTR9Q6PD62 1173 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
UBR4-211ENST00000467272 FTSJ3Q8IY81 847 aaKnown RBP14.71□□□□□ -0.05
UBR4-211ENST00000467272 KATNBL1Q9H079 304 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
UBR4-211ENST00000467272 DUSP11O75319 330 aaKnown RBP14.7□□□□□ -0.06
UBR4-211ENST00000467272 ATP5JP18859 108 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 KCNA10Q16322 511 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 TMEM240Q5SV17 173 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 TEX13BQ9BXU2 312 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 PAG1Q9NWQ8 432 aa14.7□□□□□ -0.06
UBR4-211ENST00000467272 COL11A1P12107 1806 aaPredicted RBP14.7□□□□□ -0.06
UBR4-211ENST00000467272 IGKV6D-41A0A0C4DH26 115 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 GJA9P57773 515 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 IRX5P78411 483 aaPredicted RBP14.69□□□□□ -0.06
UBR4-211ENST00000467272 AKNAD1Q5T1N1 836 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 CLASRPQ8N2M8 674 aaKnown RBP14.69□□□□□ -0.06
UBR4-211ENST00000467272 SLC43A3Q8NBI5 491 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 NUP133Q8WUM0 1156 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 TIFAQ96CG3 184 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 DNAJC2Q99543 621 aaKnown RBP14.69□□□□□ -0.06
UBR4-211ENST00000467272 HAUS7Q99871 368 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 PBX4Q9BYU1 374 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 STARD7Q9NQZ5 370 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 FAM184BQ9ULE4 1060 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 CNPY2Q9Y2B0 182 aa14.69□□□□□ -0.06
UBR4-211ENST00000467272 CD4P01730 458 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 PBX2P40425 430 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 SBK1Q52WX2 424 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 FAM126BQ8IXS8 530 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 RPAP2Q8IXW5 612 aaPredicted RBP14.68□□□□□ -0.06
UBR4-211ENST00000467272 PANK1Q8TE04 598 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 VWCEQ96DN2 955 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 PUS7LQ9H0K6 701 aaKnown RBP14.68□□□□□ -0.06
UBR4-211ENST00000467272 GOPCQ9HD26 462 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
UBR4-211ENST00000467272 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 TNFRSF10AO00220 468 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 RASA1P20936 1047 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 ADGRE1Q14246 886 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 MKL1Q969V6 931 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 NUP88Q99567 741 aaPredicted RBP14.67□□□□□ -0.06
UBR4-211ENST00000467272 SLC38A10Q9HBR0 1119 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 ZBTB40Q9NUA8 1239 aa14.67□□□□□ -0.06
UBR4-211ENST00000467272 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 F5H6K3 240 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 ARVCFO00192 962 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 NDUFB10O96000 172 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 ASGR1P07306 291 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 CSF2RAP15509 400 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 KLRC3Q07444 240 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.065e-8■■□□□ 13.9
UBR4-211ENST00000467272 ACVR2BQ13705 512 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 ATXN2LQ8WWM7 1075 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 STRBPQ96SI9 672 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 BOLA2Q9H3K6 86 aa14.66□□□□□ -0.06
UBR4-211ENST00000467272 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
UBR4-211ENST00000467272 GSG1L2A8MUP6 293 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 CCDC144BQ3MJ40 725 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
UBR4-211ENST00000467272 HERVK_113Q902F9 699 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.65□□□□□ -0.061e-14■■■■□ 25.5
UBR4-211ENST00000467272 ABHD16BQ9H3Z7 469 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 ARPP21Q9UBL0 812 aaPredicted RBP14.65□□□□□ -0.06
UBR4-211ENST00000467272 SYNPO2Q9UMS6 1093 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 SLC4A4Q9Y6R1 1079 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 ASTN1O14525 1302 aa14.65□□□□□ -0.06
UBR4-211ENST00000467272 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
UBR4-211ENST00000467272 OAZ1P54368 228 aa14.64□□□□□ -0.07
UBR4-211ENST00000467272 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
UBR4-211ENST00000467272 ZNF365Q70YC5 407 aa14.64□□□□□ -0.07
UBR4-211ENST00000467272 FAM133AQ8N9E0 248 aa14.64□□□□□ -0.07
UBR4-211ENST00000467272 ASB2Q96Q27 587 aa14.64□□□□□ -0.07
UBR4-211ENST00000467272 CXXC1Q9P0U4 656 aaPredicted RBP14.64□□□□□ -0.07
UBR4-211ENST00000467272 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
UBR4-211ENST00000467272 GRIN2DO15399 1336 aa14.64□□□□□ -0.07
UBR4-211ENST00000467272 MYH8P13535 1937 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms