RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SLC25A27O95847 323 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 HSPA8P11142 646 aaKnown RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 MAPK4P31152 587 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 OAZ1P54368 228 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 ERVK-9P63128 1117 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 ERVK-24P63145 666 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 ZNF543Q08ER8 600 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 CPLX2Q6PUV4 134 aaKnown RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 C17orf99Q6UX52 265 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 Q6ZUG5 572 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 KCTD1Q719H9 257 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 SGMS1Q86VZ5 419 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 IGDCC4Q8TDY8 1250 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 LZTS2Q9BRK4 669 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 LRRC2Q9BYS8 371 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 LY9Q9HBG7 655 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 ZSWIM6Q9HCJ5 1215 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 GPCPD1Q9NPB8 672 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 RBM28Q9NW13 759 aaKnown RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 SEC63Q9UGP8 760 aaKnown RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 CEP350Q5VT06 3117 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 FRMPD2Q68DX3 1309 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 KLF18A0A0U1RQI7 1052 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 GOLGA8AA7E2F4 631 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 GOLGA8BA8MQT2 603 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 KLRF2D3W0D1 207 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 VWA5AO00534 786 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ST18O60284 1047 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 SNHG28P0DPA3 235 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 BCRP11274 1271 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 PSMC4P43686 418 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 NEK4P51957 841 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 RCAN1P53805 252 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 PRMT2P55345 433 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ANTXR2P58335 489 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 LACTBP83111 547 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 EXOSC10Q01780 885 aaKnown RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 AKAP17AQ02040 695 aaKnown RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 GRM4Q14833 912 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 PKN2Q16513 984 aaKnown RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 RTN1Q16799 776 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 SYDE2Q5VT97 1194 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 MICU3Q86XE3 530 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 CPXCR1Q8N123 301 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 FBXL16Q8N461 479 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ZNF296Q8WUU4 475 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 SOCS4Q8WXH5 440 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 BRF1Q92994 677 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 TCEANC2Q96MN5 208 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 TEX13BQ9BXU2 312 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 UPF3BQ9BZI7 483 aaKnown RBP7.42□□□□□ -1.22
SF3B1-206ENST00000462613 SPATC1LQ9H0A9 340 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 MROH8Q9H579 483 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 EFCC1Q9HA90 598 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 PDRG1Q9NUG6 133 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 SLC5A4Q9NY91 659 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 MORF4L1Q9UBU8 362 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 FBXO40Q9UH90 709 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
SF3B1-206ENST00000462613 ZSWIM8A7E2V4 1837 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 ZNF236Q9UL36 1845 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 CPLX1O14810 134 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 STRNO43815 780 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 SEC24BO95487 1268 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 GOLGA8HP0CJ92 632 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 STAT3P40763 770 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 METAP2P50579 478 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 TROAPQ12815 778 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 RABEP1Q15276 862 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 TKFCQ3LXA3 575 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 KIAA1755Q5JYT7 1200 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 SNRNP48Q6IEG0 339 aaKnown RBP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 APOA5Q6Q788 366 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 BTNL9Q6UXG8 535 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 CTU1Q7Z7A3 348 aaKnown RBP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 NCAPG2Q86XI2 1143 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 FANCBQ8NB91 859 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 RRP36Q96EU6 259 aaKnown RBP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 NUDT12Q9BQG2 462 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 BACH2Q9BYV9 841 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 SLC38A10Q9HBR0 1119 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
SF3B1-206ENST00000462613 CCPG1Q9ULG6 757 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 ADAMTS5Q9UNA0 930 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 TRIM17Q9Y577 477 aa7.41□□□□□ -1.22
SF3B1-206ENST00000462613 MCM3APO60318 1980 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 PALM3A6NDB9 673 aaPredicted RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 ATP2A1O14983 1001 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 CDKL5O76039 1030 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 ICAM1P05362 532 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 FCER1AP12319 257 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms