RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CFAP100Q494V2 611 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 KRBA2Q6ZNG9 492 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 VSTM4Q8IW00 320 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 TMEM47Q9BQJ4 181 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 PRPF3O43395 683 aaKnown RBP14.17□□□□□ -0.14
COL4A6-204ENST00000461897 SHMT1P34896 483 aa14.17□□□□□ -0.14
COL4A6-204ENST00000461897 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
COL4A6-204ENST00000461897 NT5DC1Q5TFE4 455 aa14.17□□□□□ -0.14
COL4A6-204ENST00000461897 METTL16Q86W50 562 aaKnown RBP14.17□□□□□ -0.14
COL4A6-204ENST00000461897 CEP95Q96GE4 821 aa14.17□□□□□ -0.14
COL4A6-204ENST00000461897 DNAJC18Q9H819 358 aa14.17□□□□□ -0.14
COL4A6-204ENST00000461897 CD2APQ9Y5K6 639 aa14.17□□□□□ -0.14
COL4A6-204ENST00000461897 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
COL4A6-204ENST00000461897 hCG_1642624A0A1W2PR95 340 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 NFKBIEO00221 500 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 MMP1P03956 469 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 HLA-DOAP06340 250 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 AKR1B1P15121 316 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 H2AFXP16104 143 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 LMOD1P29536 600 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 TCP10Q12799 353 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 GRM4Q14833 912 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 SH3BP5LQ7L8J4 393 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 NIM1KQ8IY84 436 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 PRMT6Q96LA8 375 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 EHD4Q9H223 541 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 TDRD3Q9H7E2 651 aaKnown RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 ZNRF3Q9ULT6 936 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 KCNJ14Q9UNX9 436 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 IGKV6D-41A0A0C4DH26 115 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 DDTLA6NHG4 134 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 ATP1A3P13637 1013 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 KIF5BP33176 963 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 UBASH3AP57075 661 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 FBXO38Q6PIJ6 1188 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 MAD2L2Q9UI95 211 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 KCNH3Q9ULD8 1083 aa14.16□□□□□ -0.14
COL4A6-204ENST00000461897 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-204ENST00000461897 FAM193AP78312 1265 aa14.15□□□□□ -0.14
COL4A6-204ENST00000461897 AKAP17AQ02040 695 aaKnown RBP14.15□□□□□ -0.14
COL4A6-204ENST00000461897 ELF2Q15723 593 aa14.15□□□□□ -0.14
COL4A6-204ENST00000461897 FOXP4Q8IVH2 680 aaPredicted RBP14.15□□□□□ -0.14
COL4A6-204ENST00000461897 NOSTRINQ8IVI9 506 aa14.15□□□□□ -0.14
COL4A6-204ENST00000461897 KRT222Q8N1A0 295 aa14.15□□□□□ -0.14
COL4A6-204ENST00000461897 KRI1Q8N9T8 703 aaKnown RBP14.15□□□□□ -0.14
COL4A6-204ENST00000461897 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
COL4A6-204ENST00000461897 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 BTBD18B2RXH4 712 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 PTPREP23469 700 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 CXCL9Q07325 125 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 TBX2Q13207 712 aaPredicted RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 PNOCQ13519 176 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 SLC35G1Q2M3R5 365 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 TRIM65Q6PJ69 517 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 DPF2Q92785 391 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 DHX36Q9H2U1 1008 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 FOXP1Q9H334 677 aaPredicted RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 VPS54Q9P1Q0 977 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 HOOK1Q9UJC3 728 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 COL2A1P02458 1487 aaPredicted RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 FAM196BA6NMK8 535 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 TOP1P11387 765 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 SARSP49591 514 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 GNL2Q13823 731 aaKnown RBP14.14□□□□□ -0.15
COL4A6-204ENST00000461897 SYT10Q6XYQ8 523 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 TMEM139Q8IV31 216 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 TRIML1Q8N9V2 468 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 PCDHA5Q9Y5H7 936 aa14.14□□□□□ -0.15
COL4A6-204ENST00000461897 PALM3A6NDB9 673 aaPredicted RBP14.13□□□□□ -0.15
COL4A6-204ENST00000461897 ARHGAP6O43182 974 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 ENTPD3O75355 529 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 ZNF18P17022 549 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 BMP6P22004 513 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 TOB1P50616 345 aaPredicted RBP14.13□□□□□ -0.15
COL4A6-204ENST00000461897 NR5A1Q13285 461 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 RILPL1Q5EBL4 403 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 CT47A1Q5JQC4 288 aaPredicted RBP14.13□□□□□ -0.15
COL4A6-204ENST00000461897 CNNM3Q8NE01 707 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 PHF20Q9BVI0 1012 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms