RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 PPP2R3AQ06190 1150 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 WTAPQ15007 396 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 HSP90AA4PQ58FG1 418 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
GNE-203ENST00000447283 NIM1KQ8IY84 436 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
GNE-203ENST00000447283 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 RABGGTAQ92696 567 aa12.98□□□□□ -0.33
GNE-203ENST00000447283 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
GNE-203ENST00000447283 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
GNE-203ENST00000447283 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 NR5A1Q13285 461 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
GNE-203ENST00000447283 GRAMD1CQ8IYS0 662 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 MRIQ9BWK5 157 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 NAA15Q9BXJ9 866 aaKnown RBP12.97□□□□□ -0.33
GNE-203ENST00000447283 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
GNE-203ENST00000447283 BRCA1P38398 1863 aaKnown RBP12.96□□□□□ -0.33
GNE-203ENST00000447283 GAKO14976 1311 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 AKR1B15C9JRZ8 316 aaPredicted RBP12.96□□□□□ -0.33
GNE-203ENST00000447283 SEC31AO94979 1220 aaKnown RBP12.96□□□□□ -0.33
GNE-203ENST00000447283 PLCG2P16885 1265 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 BTDP43251 543 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 KIAA0825Q8IV33 1275 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
GNE-203ENST00000447283 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
GNE-203ENST00000447283 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 ERICH2A1L162 156 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 RAD17O75943 681 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 CCDC175P0C221 793 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 PBX1P40424 430 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 PPP2R5BQ15173 497 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 SPATA1Q5VX52 437 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 FANCBQ8NB91 859 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 GOLGA1Q92805 767 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 TEKT1Q969V4 418 aa12.96□□□□□ -0.34
GNE-203ENST00000447283 SASH3O75995 380 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
GNE-203ENST00000447283 SCNN1DP51172 638 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 CUL4BQ13620 913 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 USP49Q70CQ1 688 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 ZNF654Q8IZM8 581 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
GNE-203ENST00000447283 DHX58Q96C10 678 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 RNF26Q9BY78 433 aaPredicted RBP12.95□□□□□ -0.34
GNE-203ENST00000447283 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
GNE-203ENST00000447283 MRPL44Q9H9J2 332 aaKnown RBP12.95□□□□□ -0.34
GNE-203ENST00000447283 ARFGAP3Q9NP61 516 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 UTRNP46939 3433 aa12.95□□□□□ -0.34
GNE-203ENST00000447283 USP5P45974 858 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 RRP12Q5JTH9 1297 aaKnown RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 PARD6BQ9BYG5 372 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 MAST2Q6P0Q8 1798 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 ERICH4A6NGS2 130 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 PSMD14O00487 310 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 TXLNAP40222 546 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 MTF1Q14872 753 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 ZKSCAN3Q9BRR0 538 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
GNE-203ENST00000447283 ADD3Q9UEY8 706 aaKnown RBP12.94□□□□□ -0.34
GNE-203ENST00000447283 SYNRGQ9UMZ2 1314 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 A0A087X0B3 334 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 CCDC151A5D8V7 595 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 SOWAHDA6NJG2 315 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 USP17L21D6R901 530 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 TEX33O43247 280 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 BMP15O95972 392 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 FECHP22830 423 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 CRKP46108 304 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 RHBDL3P58872 404 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
GNE-203ENST00000447283 KARSQ15046 597 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms