RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 LENG1Q96BZ8 264 aaPredicted RBP26.6■■□□□ 1.85
PTPRA-207ENST00000431048 MROH7Q68CQ1 1323 aa26.6■■□□□ 1.85
PTPRA-207ENST00000431048 PLXNA1Q9UIW2 1896 aa26.59■■□□□ 1.85
PTPRA-207ENST00000431048 DNAJC25-GNG10A0A024R161 153 aa26.59■■□□□ 1.85
PTPRA-207ENST00000431048 SMIM22K7EJ46 135 aa26.59■■□□□ 1.85
PTPRA-207ENST00000431048 PPIGQ13427 754 aaKnown RBP eCLIP26.59■■□□□ 1.85
PTPRA-207ENST00000431048 ZNF467Q7Z7K2 595 aaPredicted RBP26.59■■□□□ 1.85
PTPRA-207ENST00000431048 KIF1BPQ96EK5 621 aa26.59■■□□□ 1.85
PTPRA-207ENST00000431048 COL11A1P12107 1806 aaPredicted RBP26.59■■□□□ 1.85
PTPRA-207ENST00000431048 CYP2D7A0A087X1C5 515 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 TMEM240Q5SV17 173 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 FAM83BQ5T0W9 1011 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 AKNAD1Q5T1N1 836 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 C16orf59Q7L2K0 433 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 GLT1D1Q96MS3 346 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 TEX13BQ9BXU2 312 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 MYH8P13535 1937 aa26.58■■□□□ 1.85
PTPRA-207ENST00000431048 IFIT2P09913 472 aaKnown RBP26.57■■□□□ 1.84
PTPRA-207ENST00000431048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.57■■□□□ 1.84
PTPRA-207ENST00000431048 PCSK9Q8NBP7 692 aaKnown RBP26.57■■□□□ 1.84
PTPRA-207ENST00000431048 ATXN2LQ8WWM7 1075 aaKnown RBP26.57■■□□□ 1.84
PTPRA-207ENST00000431048 DDRGK1Q96HY6 314 aa26.57■■□□□ 1.84
PTPRA-207ENST00000431048 PAG1Q9NWQ8 432 aa26.57■■□□□ 1.84
PTPRA-207ENST00000431048 ZBED9Q6R2W3 1325 aa26.57■■□□□ 1.84
PTPRA-207ENST00000431048 ATP2A1O14983 1001 aa26.56■■□□□ 1.84
PTPRA-207ENST00000431048 DDX11Q96FC9 970 aa26.56■■□□□ 1.84
PTPRA-207ENST00000431048 GAS2L1Q99501 681 aaPredicted RBP26.56■■□□□ 1.84
PTPRA-207ENST00000431048 SLF1Q9BQI6 1058 aa26.56■■□□□ 1.84
PTPRA-207ENST00000431048 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.56■■□□□ 1.84
PTPRA-207ENST00000431048 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.56■■□□□ 1.84
PTPRA-207ENST00000431048 UBE3CQ15386 1083 aa26.55■■□□□ 1.84
PTPRA-207ENST00000431048 SLFNL1Q499Z3 407 aa26.55■■□□□ 1.84
PTPRA-207ENST00000431048 PBX4Q9BYU1 374 aa26.55■■□□□ 1.84
PTPRA-207ENST00000431048 UPF3AQ9H1J1 476 aaKnown RBP26.55■■□□□ 1.84
PTPRA-207ENST00000431048 ARVCFO00192 962 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 GJA9P57773 515 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 ACVR2BQ13705 512 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 SNRNP48Q6IEG0 339 aaKnown RBP26.54■■□□□ 1.84
PTPRA-207ENST00000431048 CTR9Q6PD62 1173 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 TMEM199Q8N511 208 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 PRPF38AQ8NAV1 312 aaKnown RBP26.54■■□□□ 1.84
PTPRA-207ENST00000431048 SPC25Q9HBM1 224 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 ZHX1Q9UKY1 873 aaPredicted RBP26.54■■□□□ 1.84
PTPRA-207ENST00000431048 RIPK3Q9Y572 518 aa26.54■■□□□ 1.84
PTPRA-207ENST00000431048 MYADML2A6NDP7 307 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 ASGR1P07306 291 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 ATP5JP18859 108 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 COL9A1P20849 921 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 NKX3-2P78367 333 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 ABHD16BQ9H3Z7 469 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 NYAP2Q9P242 653 aa26.53■■□□□ 1.84
PTPRA-207ENST00000431048 BAZ2AQ9UIF9 1905 aaKnown RBP26.53■■□□□ 1.84
PTPRA-207ENST00000431048 CHD9Q3L8U1 2897 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 A0A0U1RQG5 324 aaPredicted RBP26.52■■□□□ 1.84
PTPRA-207ENST00000431048 PBX2P40425 430 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 PSRC1Q6PGN9 363 aaPredicted RBP26.52■■□□□ 1.84
PTPRA-207ENST00000431048 CCDC129Q6ZRS4 1044 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 RPAP2Q8IXW5 612 aaPredicted RBP26.52■■□□□ 1.84
PTPRA-207ENST00000431048 HAUS7Q99871 368 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 BOLA2Q9H3K6 86 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.52■■□□□ 1.84
PTPRA-207ENST00000431048 SLC4A4Q9Y6R1 1079 aa26.52■■□□□ 1.84
PTPRA-207ENST00000431048 GRXCR1A8MXD5 290 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 F5H6K3 240 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 RAD21O60216 631 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 RAB11FIP3O75154 756 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 C6orf222P0C671 652 aaPredicted RBP26.51■■□□□ 1.83
PTPRA-207ENST00000431048 CSF2RAP15509 400 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 KLRC3Q07444 240 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 ASB2Q96Q27 587 aa26.51■■□□□ 1.83
PTPRA-207ENST00000431048 ZBED4O75132 1171 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 ZNF365Q70YC5 407 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 FAM126BQ8IXS8 530 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 VTI1AQ96AJ9 217 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 NUP88Q99567 741 aaPredicted RBP26.5■■□□□ 1.83
PTPRA-207ENST00000431048 PRDM12Q9H4Q4 367 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 THEGQ9P2T0 379 aa26.5■■□□□ 1.83
PTPRA-207ENST00000431048 ARPP21Q9UBL0 812 aaPredicted RBP26.5■■□□□ 1.83
PTPRA-207ENST00000431048 TLR3O15455 904 aaKnown RBP26.49■■□□□ 1.83
PTPRA-207ENST00000431048 ADCY6O43306 1168 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 IRX5P78411 483 aaPredicted RBP26.49■■□□□ 1.83
PTPRA-207ENST00000431048 RAB30Q15771 203 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 CCDC144BQ3MJ40 725 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 SBK1Q52WX2 424 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 GNASQ5JWF2 1037 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 HERVK_113Q902F9 699 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 FGD4Q96M96 766 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 FBXO40Q9UH90 709 aa26.49■■□□□ 1.83
PTPRA-207ENST00000431048 APBB1O00213 710 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 HMMRO75330 724 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 NDUFB10O96000 172 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 CD4P01730 458 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 ZSCAN25Q6NSZ9 544 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 CHST13Q8NET6 341 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 SLC38A10Q9HBR0 1119 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 IL23AQ9NPF7 189 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 MSRAQ9UJ68 235 aa26.48■■□□□ 1.83
PTPRA-207ENST00000431048 CTAGE5O15320 804 aa26.47■■□□□ 1.83
PTPRA-207ENST00000431048 CHGBP05060 677 aa26.47■■□□□ 1.83
PTPRA-207ENST00000431048 ACRP10323 421 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms