RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 AKT1S1Q96B36 256 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 SELENOOQ9BVL4 669 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 STMN4Q9H169 189 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 KLF18A0A0U1RQI7 1052 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 SKAP2O75563 359 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 GGCXP38435 758 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 NNTQ13423 1086 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 PDCD2Q16342 344 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 FAM43BQ6ZT52 329 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 CHST3Q7LGC8 479 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 ARMC9Q7Z3E5 817 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 RNF217Q8TC41 542 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 USP28Q96RU2 1077 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 ALG1Q9BT22 464 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 NARFQ9UHQ1 456 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 TPCN1Q9ULQ1 816 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 ALDH3A1P30838 453 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 NMIQ13287 307 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 NBPF9Q3BBW0 867 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 SARM1Q6SZW1 724 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 MICU3Q86XE3 530 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 SUGP1Q8IWZ8 645 aaKnown RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 RASEFQ8IZ41 740 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 MMRN2Q9H8L6 949 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 WWC3Q9ULE0 1092 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 PDS5AQ29RF7 1337 aaKnown RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 N4BP1O75113 896 aaKnown RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 SLMAPQ14BN4 828 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 TTC39AQ5SRH9 613 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 E4F1Q66K89 784 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 AMOTL1Q8IY63 956 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 FLAD1Q8NFF5 587 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 KLHL29Q96CT2 875 aa6.51□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC43Q96MW1 224 aaKnown RBP6.51□□□□□ -1.37
HDAC9-203ENST00000406072 TIAM2Q8IVF5 1701 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 KRT18P05783 430 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CTNNA1P35221 906 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 COG7P83436 770 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 VPS36Q86VN1 386 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 KLHL7Q8IXQ5 586 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC197Q8NCU1 140 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CDC5LQ99459 802 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 BATF3Q9NR55 127 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 KCNH3Q9ULD8 1083 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 FAM133BQ5BKY9 247 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 ADALQ6DHV7 355 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NCAPH2Q6IBW4 605 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 LRRC31Q6UY01 552 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 MLKLQ8NB16 471 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 RAB3IL1Q8TBN0 382 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NCOA5Q9HCD5 579 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CARMIL3Q8ND23 1372 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CUTAO60888 179 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 PPFIA2O75334 1257 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NTSR2O95665 410 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 ATP1A3P13637 1013 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 DESP17661 470 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 RFC1P35251 1148 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 ARID5AQ03989 594 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 ANO1Q5XXA6 986 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC174Q6PII3 467 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NYAP1Q6ZVC0 841 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 DDX46Q7L014 1031 aaKnown RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 BRAPQ7Z569 592 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC25Q86WR0 208 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 TRIM58Q8NG06 486 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 CTNNBL1Q8WYA6 563 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-203ENST00000406072 OSBPL9Q96SU4 736 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 TRIM31Q9BZY9 425 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 SCOCQ9UIL1 159 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
HDAC9-203ENST00000406072 NR1D1P20393 614 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 RXRBP28702 533 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 PNOCQ13519 176 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 RIN2Q8WYP3 895 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SUCLG2Q96I99 432 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 WDR24Q96S15 920 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 NAP1L3Q99457 506 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 FUT8Q9BYC5 575 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 KAT14Q9H8E8 782 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 PPP1R1BQ9UD71 204 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 AKAP11Q9UKA4 1901 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 GOLGA8AA7E2F4 631 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 PDHA1P08559 390 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 VSNL1P62760 191 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 CCZ1BP86790 482 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 CCZ1P86791 482 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms