RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 MFSD2AQ8NA29 543 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 CPLX3Q8WVH0 158 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 C8orf37Q96NL8 207 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 CRBNQ96SW2 442 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 GMLQ99445 158 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 FOXQ1Q9C009 403 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 FBRSQ9HAH7 460 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 GINM1Q9NU53 330 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 SMPD4Q9NXE4 827 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLAMF8Q9P0V8 285 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 REV1Q9UBZ9 1251 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 TJP2Q9UDY2 1190 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 EFR3BQ9Y2G0 817 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 UPK3BL1B0FP48 263 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 CHURC1-FNTBB4DL54 471 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 UPK3BL2E5RIL1 263 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 CST3P01034 146 aaPredicted RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 RANGAP1P46060 587 aaPredicted RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 SOX9P48436 509 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 NASPP49321 788 aaPredicted RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 YARSP54577 528 aaKnown RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 NKG7Q16617 165 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 UBXN11Q5T124 520 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 CDCP2Q5VXM1 449 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 FBXW10Q5XX13 1052 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 INTS3Q68E01 1043 aaKnown RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 Q8N1X5 172 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 RBBP8NLQ8NC74 664 aaPredicted RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 ACSF2Q96CM8 615 aaPredicted RBP2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 TMEM87BQ96K49 555 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 HSPA12BQ96MM6 686 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 FERD3LQ96RJ6 166 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 TINF2Q9BSI4 451 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 RNF32Q9H0A6 362 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 PRDM10Q9NQV6 1147 aa2.68□□□□□ -1.98
RNU6-440P-201ENST00000390882 FZD7O75084 574 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 SSBP05455 408 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 DNAJA1P31689 397 aaKnown RBP2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 GBP1P32455 592 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 GIPRP48546 466 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 HK2P52789 917 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 EIF6P56537 245 aaKnown RBP2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 KRTAP10-9P60411 292 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 ARSHQ5FYA8 562 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 PRAMEF13Q5VWM6 474 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 ARMCX6Q7L4S7 300 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 UBE3DQ7Z6J8 389 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLFN12Q8IYM2 578 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 LINC01356Q8N9X3 169 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 FAM13CQ8NE31 585 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 OR6P1Q8NGX9 317 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 RIN3Q8TB24 985 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 ATG4CQ96DT6 458 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 CCDC74BQ96LY2 380 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 C1QTNF3Q9BXJ4 246 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 SRRTQ9BXP5 876 aaKnown RBP2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 PCED1AQ9H1Q7 454 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 CNNM2Q9H8M5 875 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 GMIPQ9P107 970 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 C11orf21Q9P2W6 132 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 TMEM59LQ9UK28 342 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 STRIP2Q9ULQ0 834 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZNRF3Q9ULT6 936 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 PPT2Q9UMR5 302 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 CEP131Q9UPN4 1083 aa2.67□□□□□ -1.98
RNU6-440P-201ENST00000390882 DNAJC25-GNG10A0A024R161 153 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 MEIS3P2A8K0S8 358 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 RGS13O14921 159 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLITRK5O94991 958 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 EOMESO95936 686 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 NME1P15531 152 aaKnown RBP2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 RAG1P15918 1043 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 ATP2B1P20020 1258 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 CYP7A1P22680 504 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 CCNFP41002 786 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 CHMP4BP1P59074 171 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 RALGPS1Q5JS13 557 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZNF746Q6NUN9 644 aaPredicted RBP2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 CDH24Q86UP0 819 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 PHACTR4Q8IZ21 702 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 LILRA2Q8N149 483 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 XAGE3Q8WTP9 111 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 SHDQ96IW2 340 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 KIF2CQ99661 725 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 MIPEPQ99797 713 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 TM9SF2Q99805 663 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 ANTXR1Q9H6X2 564 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 CWC22Q9HCG8 908 aaKnown RBP2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 KLHL3Q9UH77 587 aa2.66□□□□□ -1.98
RNU6-440P-201ENST00000390882 TNFRSF10CO14798 259 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 DNAJA2O60884 412 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 FGRP09769 529 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 TRHRP34981 398 aaPredicted RBP2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 ETV3P41162 512 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 KCNC1P48547 511 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 SMN1Q16637 294 aaKnown RBP2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 SFRP5Q5T4F7 317 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 OVOS1Q6IE37 1185 aa2.65□□□□□ -1.99
RNU6-440P-201ENST00000390882 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms