RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PARP3Q9Y6F1 533 aa24.23■■□□□ 1.47
CCDC38-201ENST00000344280 BARHL2Q9NY43 387 aa24.23■■□□□ 1.47
CCDC38-201ENST00000344280 SNED1Q8TER0 1413 aa24.22■■□□□ 1.47
CCDC38-201ENST00000344280 URI1O94763 535 aaPredicted RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 CDK8P49336 464 aa24.22■■□□□ 1.47
CCDC38-201ENST00000344280 FEZ1Q99689 392 aa24.22■■□□□ 1.47
CCDC38-201ENST00000344280 RPN1P04843 607 aaKnown RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 GNAQP50148 359 aa24.22■■□□□ 1.47
CCDC38-201ENST00000344280 C15orf52Q6ZUT6 534 aaKnown RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 SMAP1Q8IYB5 467 aaPredicted RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 PLIN2Q99541 437 aa24.22■■□□□ 1.47
CCDC38-201ENST00000344280 MRPL44Q9H9J2 332 aaKnown RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 DDX41Q9UJV9 622 aaKnown RBP24.22■■□□□ 1.47
CCDC38-201ENST00000344280 CDK5RAP2Q96SN8 1893 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 A0A0U1RQJ8 604 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 KLRF2D3W0D1 207 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 LDHCP07864 332 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 STAT6P42226 847 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 KRT31Q15323 416 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 LRRC15Q8TF66 581 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 ATRIPQ8WXE1 791 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 EYA3Q99504 573 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 DISC1Q9NRI5 854 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 CRY2Q49AN0 593 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 RAD9BQ6WBX8 426 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 TEX11Q8IYF3 940 aa24.21■■□□□ 1.47
CCDC38-201ENST00000344280 GPR75-ASB3A0A0A6YYF3 556 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 CASP14P31944 242 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 GNG11P61952 73 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 USP17L2Q6R6M4 530 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 DTHD1Q6ZMT9 781 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 NELFBQ8WX92 580 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 PANX2Q96RD6 677 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 RWDD2AQ9UIY3 292 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 FLT1P17948 1338 aa24.2■■□□□ 1.46
CCDC38-201ENST00000344280 GYPCP04921 128 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 GYS1P13807 737 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 PRCPP42785 496 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 PAK1Q13153 545 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 ZNF658Q5TYW1 1059 aaPredicted RBP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 C16orf86Q6ZW13 317 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 DAGLBQ8NCG7 672 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 CTAGE1Q96RT6 745 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 IRX2Q9BZI1 471 aaPredicted RBP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 POLLQ9UGP5 575 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 DDX60LQ5H9U9 1706 aaKnown RBP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 IL1R1P14778 569 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 ZSCAN20P17040 1043 aaPredicted RBP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 FXR1P51114 621 aaKnown RBP eCLIP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 RHBDL3P58872 404 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 CCDC178Q5BJE1 867 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 MFSD14BQ5SR56 506 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 PPFIBP1Q86W92 1011 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 CCDC148Q8NFR7 591 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 PYM1Q9BRP8 204 aaKnown RBP24.19■■□□□ 1.46
CCDC38-201ENST00000344280 VPS16Q9H269 839 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 OGFRQ9NZT2 677 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 GGA1Q9UJY5 639 aa24.19■■□□□ 1.46
CCDC38-201ENST00000344280 TXLNAP40222 546 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 CREBRFQ8IUR6 639 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 CERKQ8TCT0 537 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 ZNF446Q9NWS9 450 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 RNF225M0QZC1 329 aaPredicted RBP24.18■■□□□ 1.46
CCDC38-201ENST00000344280 MFAP3LO75121 409 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 SERPINB2P05120 415 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 CEP95Q96GE4 821 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 CARD6Q9BX69 1037 aa24.18■■□□□ 1.46
CCDC38-201ENST00000344280 TRIM49BA6NDI0 452 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 NT5C2P49902 561 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 FILIP1LQ4L180 1135 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 KIFC2Q96AC6 838 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 TAB2Q9NYJ8 693 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 LIMA1Q9UHB6 759 aaKnown RBP24.17■■□□□ 1.46
CCDC38-201ENST00000344280 LRRC10BA6NIK2 292 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 PMS1P54277 932 aaKnown RBP24.17■■□□□ 1.46
CCDC38-201ENST00000344280 ARHGAP29Q52LW3 1261 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 RASSF8Q8NHQ8 419 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 GJD4Q96KN9 370 aaPredicted RBP24.17■■□□□ 1.46
CCDC38-201ENST00000344280 VAT1LQ9HCJ6 419 aa24.17■■□□□ 1.46
CCDC38-201ENST00000344280 N4BP3O15049 544 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 IGSF3O75054 1194 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 H2AFXP16104 143 aaPredicted RBP24.16■■□□□ 1.46
CCDC38-201ENST00000344280 ATP2B4P23634 1241 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 NAPAP54920 295 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 NEDD1Q8NHV4 660 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 ZMYND12Q9H0C1 365 aa24.16■■□□□ 1.46
CCDC38-201ENST00000344280 GOLGA6L9A6NEM1 432 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 CASQ1P31415 396 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 TCP11X2Q5H9J9 407 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 TBC1D16Q8TBP0 767 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 SPZ1Q9BXG8 430 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 ADGRG1Q9Y653 693 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 KCNJ18B7U540 433 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 PARP1P09874 1014 aaKnown RBP24.15■■□□□ 1.46
CCDC38-201ENST00000344280 UBA7P41226 1012 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 COPB1P53618 953 aaKnown RBP24.15■■□□□ 1.46
CCDC38-201ENST00000344280 KCNJ12Q14500 433 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 GALNT17Q6IS24 598 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 LZTFL1Q9NQ48 299 aa24.15■■□□□ 1.46
CCDC38-201ENST00000344280 RMND1Q9NWS8 449 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms