RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.56
ARHGEF3-202ENST00000338458 USP17L10C9JJH3 530 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 TAL1P17542 331 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 CXCL9Q07325 125 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZYXQ15942 572 aaKnown RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 PCDHA5Q9Y5H7 936 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 MYH8P13535 1937 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 A0A087X0B3 334 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 ICA1Q05084 483 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 RRP1BQ14684 758 aaKnown RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 IDI2Q9BXS1 227 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 TMEM39BQ9GZU3 492 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 COL4A5P29400 1685 aa11.52□□□□□ -0.57
ARHGEF3-202ENST00000338458 SLC1A4P43007 532 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 NBPF9Q3BBW0 867 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 ADGRF4Q8IZF3 695 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 RASSF8Q8NHQ8 419 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 JDP2Q8WYK2 163 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 HDAC9Q9UKV0 1011 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 GJA3Q9Y6H8 435 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 IQCB1Q15051 598 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
ARHGEF3-202ENST00000338458 IGKV6D-41A0A0C4DH26 115 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 RASSF7Q02833 373 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 UBE2SQ16763 222 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZSCAN30Q86W11 494 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 PSMD1Q99460 953 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 TAOK3Q9H2K8 898 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 TMEM60Q9H2L4 133 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZNF70Q9UC06 446 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCDC39Q9UFE4 941 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 IL17AQ16552 155 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 C6orf50Q9HD87 102 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCNT1O60563 726 aaKnown RBP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 EGFRP00533 1210 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 C17orf53Q8N3J3 647 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
ARHGEF3-202ENST00000338458 VIL1P09327 827 aaKnown RBP11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCDC17Q96LX7 622 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 LMOD1P29536 600 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 ECE1P42892 770 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 TNNI2P48788 182 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 PTPN21Q16825 1174 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 ASPRV1Q53RT3 343 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 MTFR1LQ9H019 292 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 NAT10Q9H0A0 1025 aaKnown RBP11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 SH3GLB2Q9NR46 395 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 NLRP12P59046 1061 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 ATP2C1P98194 919 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 POSTNQ15063 836 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 EHD4Q9H223 541 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
ARHGEF3-202ENST00000338458 PPP1R11O60927 126 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 USH1GQ495M9 461 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 REXO1Q8N1G1 1221 aaKnown RBP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 F5H6K3 240 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 COBLO75128 1261 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 GNA11P29992 359 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 NT5C2P49902 561 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 KLRC3Q07444 240 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 KARSQ15046 597 aaKnown RBP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 CIAPIN1Q6FI81 312 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 TIGD1Q96MW7 591 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 ZMYND12Q9H0C1 365 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 QSER1Q2KHR3 1735 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 NFKBIEO00221 500 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 NONOQ15233 471 aaKnown RBP eCLIP11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 KLHL10Q6JEL2 608 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
ARHGEF3-202ENST00000338458 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms