RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 SF3A3Q12874 501 aaKnown RBP eCLIP19.09■□□□□ 0.65
GABRB3-202ENST00000311550 TRIM58Q8NG06 486 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 IQCGQ9H095 443 aaKnown RBP19.09■□□□□ 0.65
GABRB3-202ENST00000311550 SOWAHDA6NJG2 315 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 GUCY2FP51841 1108 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 PAK2Q13177 524 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 PEX26Q7Z412 305 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 FLOT1O75955 427 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 HLFQ16534 295 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 ARHGAP44Q17R89 818 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 DDX12PQ92771 950 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 ARHGEF10LQ9HCE6 1279 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 DDX41Q9UJV9 622 aaKnown RBP19.09■□□□□ 0.65
GABRB3-202ENST00000311550 PCDHA12Q9UN75 941 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 ATP2A1O14983 1001 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 ZSCAN26Q16670 478 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 TBC1D10CQ8IV04 446 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 ZNF804BA4D1E1 1349 aa19.09■□□□□ 0.65
GABRB3-202ENST00000311550 SLFN14P0C7P3 912 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 VSTM4Q8IW00 320 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 TPH2Q8IWU9 490 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 FBF1Q8TES7 1133 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 TBC1D22AQ8WUA7 517 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.65
GABRB3-202ENST00000311550 VIMP08670 466 aaKnown RBP19.08■□□□□ 0.65
GABRB3-202ENST00000311550 CPXCR1Q8N123 301 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 NAP1L3Q99457 506 aaPredicted RBP19.08■□□□□ 0.65
GABRB3-202ENST00000311550 NT5C3AQ9H0P0 336 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 SPTLC3Q9NUV7 552 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 SAMD15Q9P1V8 674 aa19.08■□□□□ 0.65
GABRB3-202ENST00000311550 TUBGCP2Q9BSJ2 902 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 PSTPIP2Q9H939 334 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 CRB1P82279 1406 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 SCNN1DP51172 638 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 FNBP4Q8N3X1 1017 aaPredicted RBP19.08■□□□□ 0.64
GABRB3-202ENST00000311550 CDC23Q9UJX2 597 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 PRR16Q569H4 304 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 ACRBPQ8NEB7 543 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 CNOT6LQ96LI5 555 aaKnown RBP19.08■□□□□ 0.64
GABRB3-202ENST00000311550 ATP8A2Q9NTI2 1148 aa19.08■□□□□ 0.64
GABRB3-202ENST00000311550 PDE11AQ9HCR9 933 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 MYCLP12524 364 aaPredicted RBP19.07■□□□□ 0.64
GABRB3-202ENST00000311550 CCDC144BQ3MJ40 725 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 FMNL3Q8IVF7 1028 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 FNBP1Q96RU3 617 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 CHGBP05060 677 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 ERFEQ4G0M1 354 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 STRBPQ96SI9 672 aaKnown RBP19.07■□□□□ 0.64
GABRB3-202ENST00000311550 POLR2FP61218 127 aaKnown RBP19.07■□□□□ 0.64
GABRB3-202ENST00000311550 IL25Q9H293 177 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 IQSEC2Q5JU85 1478 aa19.07■□□□□ 0.64
GABRB3-202ENST00000311550 LIFRP42702 1097 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 SRGAP1Q7Z6B7 1085 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 RPGRIP1Q96KN7 1286 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 RABGGTAQ92696 567 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 LRRC45Q96CN5 670 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 PANK4Q9NVE7 773 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 ABCB4P21439 1286 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 NF2P35240 595 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 ENOX1Q8TC92 643 aaKnown RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 U2AF1L4Q8WU68 220 aaKnown RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 TSKSQ9UJT2 592 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 ACTN4O43707 911 aaKnown RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 PPFIA1Q13136 1202 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 HYOU1Q9Y4L1 999 aa19.06■□□□□ 0.64
GABRB3-202ENST00000311550 RPAP1Q9BWH6 1393 aaPredicted RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 MRRFQ96E11 262 aaKnown RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 SRPRBQ9Y5M8 271 aaKnown RBP19.06■□□□□ 0.64
GABRB3-202ENST00000311550 PCDHA4Q9UN74 947 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 KCNK3O14649 394 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 XRCC5P13010 732 aaKnown RBP19.05■□□□□ 0.64
GABRB3-202ENST00000311550 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
GABRB3-202ENST00000311550 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 DDX25Q9UHL0 483 aaKnown RBP19.05■□□□□ 0.64
GABRB3-202ENST00000311550 SMTNP53814 917 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 UBL4BQ8N7F7 174 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 NEDD4P46934 1319 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 PCP11498 1178 aaKnown RBP19.05■□□□□ 0.64
GABRB3-202ENST00000311550 CYP2J2P51589 502 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 B4GALNT4Q76KP1 1039 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 MYO1AQ9UBC5 1043 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 PHLPP2Q6ZVD8 1323 aa19.05■□□□□ 0.64
GABRB3-202ENST00000311550 ZMYND10O75800 440 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 WDR44Q5JSH3 913 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 KIFAP3Q92845 792 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 NRKQ7Z2Y5 1582 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 PLEKHA8P1O95397 391 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 ZBTB16Q05516 673 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 GALNT17Q6IS24 598 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 ARHGEF40Q8TER5 1519 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 HGSO14964 777 aaPredicted RBP19.04■□□□□ 0.64
GABRB3-202ENST00000311550 CASP1P29466 404 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 INPP5BP32019 993 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 SARM1Q6SZW1 724 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 USP17L8P0C7I0 530 aa19.04■□□□□ 0.64
GABRB3-202ENST00000311550 TRAPPC10P48553 1259 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms