RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 IKQ13123 557 aaPredicted RBP26.33■■□□□ 1.81
LINC01116-201ENST00000295549 PPP2R5BQ15173 497 aa26.33■■□□□ 1.81
LINC01116-201ENST00000295549 MB21D1Q8N884 522 aa26.33■■□□□ 1.81
LINC01116-201ENST00000295549 KLRF2D3W0D1 207 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 FDX1P10109 184 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 RXRAP19793 462 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 PDIA3P30101 505 aaKnown RBP26.32■■□□□ 1.8
LINC01116-201ENST00000295549 POTEEQ6S8J3 1075 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 C17orf99Q6UX52 265 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 KIFC2Q96AC6 838 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 ATG4CQ96DT6 458 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 R3HDMLQ9H3Y0 253 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 HPS5Q9UPZ3 1129 aa26.32■■□□□ 1.8
LINC01116-201ENST00000295549 GOLGA8BA8MQT2 603 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 VWA5AO00534 786 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 TBC1D8O95759 1140 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 SLC16A2P36021 539 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 GNAQP50148 359 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 SYDE2Q5VT97 1194 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 LZTS2Q9BRK4 669 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 RBPJLQ9UBG7 517 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 PRR12Q9ULL5 1215 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 NAP1L2Q9ULW6 460 aaPredicted RBP26.31■■□□□ 1.8
LINC01116-201ENST00000295549 RABGAP1Q9Y3P9 1069 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 NID2Q14112 1375 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 METAP2P50579 478 aaKnown RBP eCLIP26.31■■□□□ 1.8
LINC01116-201ENST00000295549 RAB11FIP4Q86YS3 637 aa26.31■■□□□ 1.8
LINC01116-201ENST00000295549 LARP6Q9BRS8 491 aaKnown RBP26.31■■□□□ 1.8
LINC01116-201ENST00000295549 RBM28Q9NW13 759 aaKnown RBP26.31■■□□□ 1.8
LINC01116-201ENST00000295549 GOLGA8AA7E2F4 631 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 ST18O60284 1047 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 BCRP11274 1271 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 SMARCA1P28370 1054 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 RTN1Q16799 776 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 NOM1Q5C9Z4 860 aaKnown RBP26.3■■□□□ 1.8
LINC01116-201ENST00000295549 SAMD1Q6SPF0 538 aaPredicted RBP26.3■■□□□ 1.8
LINC01116-201ENST00000295549 CCDC144CPQ8IYA2 1237 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 UBA5Q9GZZ9 404 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 SLC38A10Q9HBR0 1119 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 MORF4L1Q9UBU8 362 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 TPCN1Q9ULQ1 816 aa26.3■■□□□ 1.8
LINC01116-201ENST00000295549 RLFQ13129 1914 aa26.29■■□□□ 1.8
LINC01116-201ENST00000295549 CCDC196A0A1B0GTZ2 297 aa26.29■■□□□ 1.8
LINC01116-201ENST00000295549 FAM110CQ1W6H9 321 aa26.29■■□□□ 1.8
LINC01116-201ENST00000295549 TXNRD2Q9NNW7 524 aa26.29■■□□□ 1.8
LINC01116-201ENST00000295549 FAM217BQ9NTX9 383 aaPredicted RBP26.29■■□□□ 1.8
LINC01116-201ENST00000295549 CPA4Q9UI42 421 aa26.29■■□□□ 1.8
LINC01116-201ENST00000295549 ZBED4O75132 1171 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 CNMDO75829 334 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 ADGRF4Q8IZF3 695 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 ANKRD13CQ8N6S4 541 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 REPS2Q8NFH8 660 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 CPVLQ9H3G5 476 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 RIOX1Q9H6W3 641 aa26.28■■□□□ 1.8
LINC01116-201ENST00000295549 ATP2A1O14983 1001 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 CDC27P30260 824 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 TMTC3Q6ZXV5 915 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 NBPF11Q86T75 865 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 GPRC5AQ8NFJ5 357 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 SPZ1Q9BXG8 430 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 RANBP17Q9H2T7 1088 aaKnown RBP26.27■■□□□ 1.8
LINC01116-201ENST00000295549 BTBD7Q9P203 1132 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 LIMCH1Q9UPQ0 1083 aa26.27■■□□□ 1.8
LINC01116-201ENST00000295549 OAZ1P54368 228 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 ERVK-9P63128 1117 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 ERVK-24P63145 666 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 TMEM132BQ14DG7 1078 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 SLC35G1Q2M3R5 365 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 SRBD1Q8N5C6 995 aaKnown RBP26.26■■□□□ 1.79
LINC01116-201ENST00000295549 PAGR1Q9BTK6 254 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 JMJD4Q9H9V9 463 aa26.26■■□□□ 1.79
LINC01116-201ENST00000295549 CYTH3O43739 400 aa26.25■■□□□ 1.79
LINC01116-201ENST00000295549 PFKFB2O60825 505 aa26.25■■□□□ 1.79
LINC01116-201ENST00000295549 PLEKHA8P1O95397 391 aa26.25■■□□□ 1.79
LINC01116-201ENST00000295549 ADD1P35611 737 aaKnown RBP26.25■■□□□ 1.79
LINC01116-201ENST00000295549 MTMR8Q96EF0 704 aa26.25■■□□□ 1.79
LINC01116-201ENST00000295549 ZNF214Q9UL59 606 aaPredicted RBP26.25■■□□□ 1.79
LINC01116-201ENST00000295549 CTDP1Q9Y5B0 961 aaPredicted RBP26.25■■□□□ 1.79
LINC01116-201ENST00000295549 PARP14Q460N5 1801 aa26.25■■□□□ 1.79
LINC01116-201ENST00000295549 GPR25O00155 361 aa26.24■■□□□ 1.79
LINC01116-201ENST00000295549 CCT2P78371 535 aaKnown RBP26.24■■□□□ 1.79
LINC01116-201ENST00000295549 ME3Q16798 604 aa26.24■■□□□ 1.79
LINC01116-201ENST00000295549 Q3C1V9 767 aa26.24■■□□□ 1.79
LINC01116-201ENST00000295549 NOL8Q76FK4 1167 aaKnown RBP26.24■■□□□ 1.79
LINC01116-201ENST00000295549 SPATC1LQ9H0A9 340 aa26.24■■□□□ 1.79
LINC01116-201ENST00000295549 SLKQ9H2G2 1235 aaPredicted RBP26.24■■□□□ 1.79
LINC01116-201ENST00000295549 DHX16O60231 1041 aaKnown RBP26.23■■□□□ 1.79
LINC01116-201ENST00000295549 PEX10O60683 326 aa26.23■■□□□ 1.79
LINC01116-201ENST00000295549 MCM2P49736 904 aa26.23■■□□□ 1.79
LINC01116-201ENST00000295549 FUT2Q10981 343 aa26.23■■□□□ 1.79
LINC01116-201ENST00000295549 ZSCAN31Q96LW9 406 aaPredicted RBP26.23■■□□□ 1.79
LINC01116-201ENST00000295549 VAT1LQ9HCJ6 419 aa26.23■■□□□ 1.79
LINC01116-201ENST00000295549 ZNF536O15090 1300 aa26.23■■□□□ 1.79
LINC01116-201ENST00000295549 STAT3P40763 770 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 CCNA1P78396 465 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 SP3Q02447 781 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 STK3Q13188 491 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 CMTR1Q8N1G2 835 aaKnown RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 TEX13BQ9BXU2 312 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 NCOA5Q9HCD5 579 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms