RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 LEMD3Q9Y2U8 911 aa22.56■■□□□ 1.2
SCUBE1-201ENST00000290460 BAG3O95817 575 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 GYPCP04921 128 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 FXR1P51114 621 aaKnown RBP eCLIP22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 PAK1Q13153 545 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 FILIP1LQ4L180 1135 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 TMED8Q6PL24 325 aaPredicted RBP22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 NELFBQ8WX92 580 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 UBXN4Q92575 508 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 KIFC2Q96AC6 838 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 VPS16Q9H269 839 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 LZTFL1Q9NQ48 299 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 MYH1P12882 1939 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 MFAP3LO75121 409 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 TADA3O75528 432 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 RASA1P20936 1047 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 CLCN6P51797 869 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 AMOTL1Q8IY63 956 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 DISC1Q9NRI5 854 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 RWDD2AQ9UIY3 292 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 PRDM4Q9UKN5 801 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
SCUBE1-201ENST00000290460 CCDC175P0C221 793 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 TXLNAP40222 546 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 NAALADL2Q58DX5 795 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 ZNF658Q5TYW1 1059 aaPredicted RBP22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 ZNF804AQ7Z570 1209 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 RTFDC1Q9BY42 306 aaPredicted RBP22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 TAB2Q9NYJ8 693 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 STXBP3O00186 592 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 N4BP3O15049 544 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 PRCPP42785 496 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 GSTO1P78417 241 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 RASSF8Q8NHQ8 419 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 PYM1Q9BRP8 204 aaKnown RBP22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 EPC1Q9H2F5 836 aa22.54■■□□□ 1.2
SCUBE1-201ENST00000290460 PPP4CP60510 307 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 GPSM2P81274 684 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 DTHD1Q6ZMT9 781 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 FAM196AQ6ZSG2 479 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 SRRTQ9BXP5 876 aaKnown RBP22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 BARHL2Q9NY43 387 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 ADGRG1Q9Y653 693 aa22.53■■□□□ 1.2
SCUBE1-201ENST00000290460 TRIM49BA6NDI0 452 aa22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 BTDP43251 543 aa22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 GNAQP50148 359 aa22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 PALM3A6NDB9 673 aaPredicted RBP22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 RNF225M0QZC1 329 aaPredicted RBP22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 TOM1O60784 492 aa22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 MAP3K9P80192 1104 aa22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 LIMA1Q9UHB6 759 aaKnown RBP22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 DDX60LQ5H9U9 1706 aaKnown RBP22.52■■□□□ 1.2
SCUBE1-201ENST00000290460 LY75O60449 1722 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 KCNJ18B7U540 433 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 KLRF2D3W0D1 207 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 KCNJ12Q14500 433 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 KRT222Q8N1A0 295 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 CCDC148Q8NFR7 591 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 LRRC15Q8TF66 581 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 TCP11L1Q9NUJ3 509 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 MRFAP1Q9Y605 127 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 SNED1Q8TER0 1413 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 UFL1O94874 794 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 COPB1P53618 953 aaKnown RBP22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 TCP11X2Q5H9J9 407 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 CCDC12Q8WUD4 166 aaPredicted RBP22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 RMND1Q9NWS8 449 aa22.51■■□□□ 1.19
SCUBE1-201ENST00000290460 EFCAB8A8MWE9 144 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 PRR5LQ6MZQ0 368 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 NAA15Q9BXJ9 866 aaKnown RBP22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 CD209Q9NNX6 404 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 LRRC10BA6NIK2 292 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 CDK8P49336 464 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 PMS1P54277 932 aaKnown RBP22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 CNGA4Q8IV77 575 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 DAGLBQ8NCG7 672 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 RPGRQ92834 1020 aaKnown RBP22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 EYA3Q99504 573 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 FAM53CQ9NYF3 392 aa22.5■■□□□ 1.19
SCUBE1-201ENST00000290460 ITIH6Q6UXX5 1313 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 ZBTB22O15209 634 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 LDHCP07864 332 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 UBA7P41226 1012 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 PPP2R3AQ06190 1150 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 CCDC178Q5BJE1 867 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 USP17L2Q6R6M4 530 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 ST7Q9NRC1 585 aa22.49■■□□□ 1.19
SCUBE1-201ENST00000290460 TEX11Q8IYF3 940 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 ACRBPQ8NEB7 543 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 USP21Q9UK80 565 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 ZHX1Q9UKY1 873 aaPredicted RBP22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 NAPAP54920 295 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 ERVK-24P63145 666 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 UTP14CQ5TAP6 766 aaKnown RBP22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 IRF2BP1Q8IU81 584 aa22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 NUP88Q99567 741 aaPredicted RBP22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 GTPBP4Q9BZE4 634 aaKnown RBP22.48■■□□□ 1.19
SCUBE1-201ENST00000290460 ABL1P00519 1130 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms