RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 KIF5CO60282 957 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 PNMA1Q8ND90 353 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 GOLGA1Q92805 767 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 KAT14Q9H8E8 782 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 STAT6P42226 847 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 GRIK5Q16478 980 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 SLC44A5Q8NCS7 719 aa18.88■□□□□ 0.61
PDE4C-201ENST00000262805 SMARCC1Q92922 1105 aaPredicted RBP18.88■□□□□ 0.61
PDE4C-201ENST00000262805 NUP88Q99567 741 aaPredicted RBP18.88■□□□□ 0.61
PDE4C-201ENST00000262805 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
PDE4C-201ENST00000262805 CYTH3O43739 400 aa18.87■□□□□ 0.61
PDE4C-201ENST00000262805 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
PDE4C-201ENST00000262805 NGLY1Q96IV0 654 aa18.87■□□□□ 0.61
PDE4C-201ENST00000262805 C8orf37Q96NL8 207 aa18.87■□□□□ 0.61
PDE4C-201ENST00000262805 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
PDE4C-201ENST00000262805 PCDHA4Q9UN74 947 aa18.87■□□□□ 0.61
PDE4C-201ENST00000262805 M0R2N6 131 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 KIF5BP33176 963 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 LONP1P36776 959 aaKnown RBP18.86■□□□□ 0.61
PDE4C-201ENST00000262805 ARHGAP25P42331 645 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 SH3RF3Q8TEJ3 882 aaPredicted RBP18.86■□□□□ 0.61
PDE4C-201ENST00000262805 ZBTB9Q96C00 473 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 CHP1Q99653 195 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 UBXN6Q9BZV1 441 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 CPVLQ9H3G5 476 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 DISC1Q9NRI5 854 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 TXLNAP40222 546 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 INF2Q27J81 1249 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 C12orf60Q5U649 245 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 ARL6IP4Q66PJ3 421 aaKnown RBP18.86■□□□□ 0.61
PDE4C-201ENST00000262805 WWC2Q6AWC2 1192 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 SRGAP1Q7Z6B7 1085 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
PDE4C-201ENST00000262805 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 SLF1Q9BQI6 1058 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
PDE4C-201ENST00000262805 KRT9P35527 623 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 DIXDC1Q155Q3 683 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
PDE4C-201ENST00000262805 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 EEF2KMTQ96G04 330 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 FUT8Q9BYC5 575 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 ANKZF1Q9H8Y5 726 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 TRIM10Q9UDY6 481 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 CDC23Q9UJX2 597 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 PCDHA6Q9UN73 950 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 PCDHA8Q9Y5H6 950 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
PDE4C-201ENST00000262805 CALML3P27482 149 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 UBXN1Q04323 297 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 ARFGAP3Q9NP61 516 aa18.85■□□□□ 0.61
PDE4C-201ENST00000262805 PARP1P09874 1014 aaKnown RBP18.84■□□□□ 0.61
PDE4C-201ENST00000262805 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 TM4SF1P30408 202 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 KIF4BQ2VIQ3 1234 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 TMTC1Q8IUR5 882 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 ADSSL1Q8N142 457 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 PNKPQ96T60 521 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 REXO2Q9Y3B8 237 aaKnown RBP18.84■□□□□ 0.61
PDE4C-201ENST00000262805 KLRC4O43908 158 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 HEATR3Q7Z4Q2 680 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 GPR101Q96P66 508 aaPredicted RBP18.84■□□□□ 0.61
PDE4C-201ENST00000262805 SETDB2Q96T68 719 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 TFR2Q9UP52 801 aa18.84■□□□□ 0.61
PDE4C-201ENST00000262805 OAS2P29728 719 aaKnown RBP18.83■□□□□ 0.61
PDE4C-201ENST00000262805 USP5P45974 858 aa18.83■□□□□ 0.61
PDE4C-201ENST00000262805 GRM4Q14833 912 aa18.83■□□□□ 0.61
PDE4C-201ENST00000262805 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.61
PDE4C-201ENST00000262805 TTF2Q9UNY4 1162 aaKnown RBP18.83■□□□□ 0.61
PDE4C-201ENST00000262805 CCDC194A0A1B0GVG4 234 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 TTC26A0AVF1 554 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 SPAG1Q07617 926 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 LONRF2Q1L5Z9 754 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 CYP26C1Q6V0L0 522 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 DTHD1Q6ZMT9 781 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 DGKHQ86XP1 1220 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 RASSF8Q8NHQ8 419 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 PYM1Q9BRP8 204 aaKnown RBP18.83■□□□□ 0.6
PDE4C-201ENST00000262805 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 RMND1Q9NWS8 449 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 SBF2Q86WG5 1849 aa18.83■□□□□ 0.6
PDE4C-201ENST00000262805 SMC1AQ14683 1233 aaKnown RBP18.82■□□□□ 0.6
PDE4C-201ENST00000262805 SH3GLB2Q9NR46 395 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 MYH1P12882 1939 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 STXBP3O00186 592 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 ATP8B1O43520 1251 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 CYP2C19P33261 490 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 FAM98CQ17RN3 349 aaKnown RBP18.82■□□□□ 0.6
PDE4C-201ENST00000262805 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 MKNK2Q9HBH9 465 aa18.82■□□□□ 0.6
PDE4C-201ENST00000262805 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
PDE4C-201ENST00000262805 ST5P78524 1137 aa18.81■□□□□ 0.6
PDE4C-201ENST00000262805 NARFQ9UHQ1 456 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms