RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 TMTC3Q6ZXV5 915 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
SNX4-201ENST00000251775 ANKRD2Q9GZV1 360 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 BTAF1O14981 1849 aa21.36■■□□□ 1.01
SNX4-201ENST00000251775 GNPATO15228 680 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 NPY5RQ15761 445 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 CNTNAP5Q8WYK1 1306 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 TM4SF1P30408 202 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 SRBD1Q8N5C6 995 aaKnown RBP21.35■■□□□ 1.01
SNX4-201ENST00000251775 ACRBPQ8NEB7 543 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 GBP3Q9H0R5 595 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
SNX4-201ENST00000251775 A0A087X0B3 334 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CTAGE15A4D2H0 777 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 LRRIQ3A6PVS8 624 aaPredicted RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 ZPR1O75312 459 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CTAGE8P0CG41 777 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CASP14P31944 242 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 WHAMMP3Q1A5X7 153 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 SPATA1Q5VX52 437 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 LRRC31Q6UY01 552 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CTAGE6Q86UF2 777 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CTAGE4Q8IX94 777 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 TNFRSF25Q93038 417 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 PHACTR2O75167 634 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 CD44P16070 742 aaKnown RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 FECHP22830 423 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 MAGEA9P43362 315 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 HSP90B2PQ58FF3 399 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 TPTE2Q6XPS3 522 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 NOA1Q8NC60 698 aaKnown RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 EPSTI1Q96J88 318 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 NAPGQ99747 312 aaPredicted RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 ATP8A2Q9NTI2 1148 aa21.34■■□□□ 1.01
SNX4-201ENST00000251775 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 TTF2Q9UNY4 1162 aaKnown RBP21.34■■□□□ 1.01
SNX4-201ENST00000251775 GYPCP04921 128 aa21.33■■□□□ 1.01
SNX4-201ENST00000251775 FXR1P51114 621 aaKnown RBP eCLIP21.33■■□□□ 1.01
SNX4-201ENST00000251775 KANK3Q6NY19 840 aa21.33■■□□□ 1.01
SNX4-201ENST00000251775 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
SNX4-201ENST00000251775 IRS2Q9Y4H2 1338 aa21.33■■□□□ 1.01
SNX4-201ENST00000251775 EIF3CLB5ME19 914 aaKnown RBP21.33■■□□□ 1
SNX4-201ENST00000251775 STX17P56962 302 aa21.33■■□□□ 1
SNX4-201ENST00000251775 VPS72Q15906 364 aa21.33■■□□□ 1
SNX4-201ENST00000251775 CDKAL1Q5VV42 579 aa21.33■■□□□ 1
SNX4-201ENST00000251775 GOLGA6L1Q8N7Z2 621 aa21.33■■□□□ 1
SNX4-201ENST00000251775 C8orf37Q96NL8 207 aa21.33■■□□□ 1
SNX4-201ENST00000251775 EIF3CQ99613 913 aaKnown RBP21.33■■□□□ 1
SNX4-201ENST00000251775 CUL4BQ13620 913 aa21.32■■□□□ 1
SNX4-201ENST00000251775 KLHL10Q6JEL2 608 aa21.32■■□□□ 1
SNX4-201ENST00000251775 SYNRGQ9UMZ2 1314 aa21.32■■□□□ 1
SNX4-201ENST00000251775 TNRC6CQ9HCJ0 1690 aaKnown RBP21.32■■□□□ 1
SNX4-201ENST00000251775 ARHGAP25P42331 645 aa21.32■■□□□ 1
SNX4-201ENST00000251775 ZNF174Q15697 407 aa21.32■■□□□ 1
SNX4-201ENST00000251775 SBK1Q52WX2 424 aa21.32■■□□□ 1
SNX4-201ENST00000251775 CTCFLQ8NI51 663 aaPredicted RBP21.32■■□□□ 1
SNX4-201ENST00000251775 NGLY1Q96IV0 654 aa21.32■■□□□ 1
SNX4-201ENST00000251775 MED4Q9NPJ6 270 aa21.32■■□□□ 1
SNX4-201ENST00000251775 ARPP21Q9UBL0 812 aaPredicted RBP21.32■■□□□ 1
SNX4-201ENST00000251775 SLC4A8Q2Y0W8 1093 aa21.31■■□□□ 1
SNX4-201ENST00000251775 PACS2Q86VP3 889 aa21.31■■□□□ 1
SNX4-201ENST00000251775 CNGA4Q8IV77 575 aa21.31■■□□□ 1
SNX4-201ENST00000251775 FAM204AQ9H8W3 233 aa21.31■■□□□ 1
SNX4-201ENST00000251775 TUBBP07437 444 aa21.31■■□□□ 1
SNX4-201ENST00000251775 VEGFAP15692 232 aaPredicted RBP21.31■■□□□ 1
SNX4-201ENST00000251775 ERVK-24P63145 666 aa21.31■■□□□ 1
SNX4-201ENST00000251775 AMPD2Q01433 879 aa21.31■■□□□ 1
SNX4-201ENST00000251775 WDR93Q6P2C0 686 aa21.31■■□□□ 1
SNX4-201ENST00000251775 CERS3Q8IU89 383 aa21.31■■□□□ 1
SNX4-201ENST00000251775 ARHGEF1Q92888 912 aaKnown RBP21.31■■□□□ 1
SNX4-201ENST00000251775 CCDC51Q96ER9 411 aa21.31■■□□□ 1
SNX4-201ENST00000251775 SBF2Q86WG5 1849 aa21.31■■□□□ 1
SNX4-201ENST00000251775 MYH8P13535 1937 aa21.3■■□□□ 1
SNX4-201ENST00000251775 CT47A1Q5JQC4 288 aaPredicted RBP21.3■■□□□ 1
SNX4-201ENST00000251775 FAM182BQ5T319 152 aa21.3■■□□□ 1
SNX4-201ENST00000251775 RCSD1Q6JBY9 416 aa21.3■■□□□ 1
SNX4-201ENST00000251775 SYMPKQ92797 1274 aaKnown RBP21.3■■□□□ 1
SNX4-201ENST00000251775 BRMS1Q9HCU9 246 aa21.3■■□□□ 1
SNX4-201ENST00000251775 ADAMTS3O15072 1205 aa21.3■■□□□ 1
SNX4-201ENST00000251775 USP17L8P0C7I0 530 aa21.3■■□□□ 1
SNX4-201ENST00000251775 TTC38Q5R3I4 469 aa21.3■■□□□ 1
SNX4-201ENST00000251775 CTAGE1Q96RT6 745 aa21.3■■□□□ 1
SNX4-201ENST00000251775 MCM9Q9NXL9 1143 aa21.3■■□□□ 1
SNX4-201ENST00000251775 CCNL1Q9UK58 526 aaPredicted RBP21.3■■□□□ 1
SNX4-201ENST00000251775 RTCBQ9Y3I0 505 aaKnown RBP21.3■■□□□ 1
SNX4-201ENST00000251775 TSPY2A6NKD2 308 aa21.29■■□□□ 1
SNX4-201ENST00000251775 AFMP43652 599 aa21.29■■□□□ 1
SNX4-201ENST00000251775 CORO7P57737 925 aa21.29■■□□□ 1
SNX4-201ENST00000251775 NCAPH2Q6IBW4 605 aa21.29■■□□□ 1
SNX4-201ENST00000251775 ITIH6Q6UXX5 1313 aa21.29■■□□□ 1
SNX4-201ENST00000251775 CASP1P29466 404 aa21.29■■□□□ 1
SNX4-201ENST00000251775 TTC31Q49AM3 519 aaPredicted RBP21.29■■□□□ 1
SNX4-201ENST00000251775 ICE2Q659A1 982 aa21.29■■□□□ 1
SNX4-201ENST00000251775 SH3RF1Q7Z6J0 888 aa21.29■■□□□ 1
SNX4-201ENST00000251775 TMTC1Q8IUR5 882 aa21.29■■□□□ 1
SNX4-201ENST00000251775 FERMT2Q96AC1 680 aa21.29■■□□□ 1
SNX4-201ENST00000251775 ACBD3Q9H3P7 528 aa21.29■■□□□ 1
SNX4-201ENST00000251775 MYO1AQ9UBC5 1043 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms