RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 USP17L21D6R901 530 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 TIMP1P01033 207 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 RHPN1Q8TCX5 695 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 FAM184BQ9ULE4 1060 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
DDX39A-201ENST00000242776 MYH7P12883 1935 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 NEFLP07196 543 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 CSF2RAP15509 400 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 IGFBP4P22692 258 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 ANKRD33Q7Z3H0 272 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 CPXCR1Q8N123 301 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 PBX4Q9BYU1 374 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 ZNF214Q9UL59 606 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-201ENST00000242776 ADAMTS5Q9UNA0 930 aa16.58■□□□□ 0.24
DDX39A-201ENST00000242776 TCF20Q9UGU0 1960 aaKnown RBP16.58■□□□□ 0.24
DDX39A-201ENST00000242776 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 C6orf222P0C671 652 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 TMEM240Q5SV17 173 aa16.57■□□□□ 0.24
DDX39A-201ENST00000242776 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
DDX39A-201ENST00000242776 AMOTL1Q8IY63 956 aa16.57■□□□□ 0.24
DDX39A-201ENST00000242776 TSEN34Q9BSV6 310 aaKnown RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
DDX39A-201ENST00000242776 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
DDX39A-201ENST00000242776 ADCY6O43306 1168 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 C12orf60Q5U649 245 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 MFSD5Q6N075 450 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 ZNF365Q70YC5 407 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
DDX39A-201ENST00000242776 KLHDC9Q8NEP7 349 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 GLT1D1Q96MS3 346 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 TBX21Q9UL17 535 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 MUC3AQ02505 3323 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
DDX39A-201ENST00000242776 MOXD2PA6NHM9 499 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 ASGR1P07306 291 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 ADD2P35612 726 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 PPIGQ13427 754 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■□□□ 12.2
DDX39A-201ENST00000242776 C16orf86Q6ZW13 317 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 CTDP1Q9Y5B0 961 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-201ENST00000242776 SLC4A4Q9Y6R1 1079 aa16.55■□□□□ 0.24
DDX39A-201ENST00000242776 CYP2C18P33260 490 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 ADGRE1Q14246 886 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 CCSAPQ6IQ19 270 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-201ENST00000242776 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 ADAMTS19Q8TE59 1207 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 NKX2-4Q9H2Z4 354 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
DDX39A-201ENST00000242776 RAVER2Q9HCJ3 691 aaKnown RBP16.54■□□□□ 0.24
DDX39A-201ENST00000242776 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 ROBO3Q96MS0 1386 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 BEX3Q00994 111 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 TEX13BQ9BXU2 312 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-201ENST00000242776 DDX19BQ9UMR2 479 aa16.54■□□□□ 0.24
DDX39A-201ENST00000242776 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
DDX39A-201ENST00000242776 COPB2P35606 906 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 GNASQ5JWF2 1037 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
DDX39A-201ENST00000242776 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 ASB2Q96Q27 587 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
DDX39A-201ENST00000242776 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
DDX39A-201ENST00000242776 MROH7Q68CQ1 1323 aa16.52■□□□□ 0.24
DDX39A-201ENST00000242776 A0A0U1RQG5 324 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 ARVCFO00192 962 aa16.52■□□□□ 0.23
DDX39A-201ENST00000242776 PTGS1P23219 599 aa16.52■□□□□ 0.23
DDX39A-201ENST00000242776 CDK7P50613 346 aa16.52■□□□□ 0.23
DDX39A-201ENST00000242776 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.23
DDX39A-201ENST00000242776 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms