RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TLR2O60603 784 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 PEX10O60683 326 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 HMGB1P09429 215 aaKnown RBP15.48■□□□□ 0.07
GTF3A-209ENST00000640289 BMP3P12645 472 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 PSMA5P28066 241 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
GTF3A-209ENST00000640289 GMCL1Q96IK5 515 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 TMEM87BQ96K49 555 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 MTA3Q9BTC8 594 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 CPA4Q9UI42 421 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 ISY1Q9ULR0 285 aaKnown RBP15.48■□□□□ 0.07
GTF3A-209ENST00000640289 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
GTF3A-209ENST00000640289 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
GTF3A-209ENST00000640289 SPDYE16A6NNV3 312 aaPredicted RBP15.47■□□□□ 0.07
GTF3A-209ENST00000640289 TMEM232C9JQI7 657 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 FLOT1O75955 427 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 PDHBP11177 359 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 ANAPC15P60006 121 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 HERVK_113P62684 666 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 CCDC96Q2M329 555 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 POTEEQ6S8J3 1075 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 DCAF4Q8WV16 495 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 C22orf23Q9BZE7 217 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
GTF3A-209ENST00000640289 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
GTF3A-209ENST00000640289 WDR19Q8NEZ3 1342 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 GOLGA8HP0CJ92 632 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 SNHG28P0DPA3 235 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
GTF3A-209ENST00000640289 DSG3P32926 999 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 COG2Q14746 738 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 NFXL1Q6ZNB6 911 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 Q6ZUG5 572 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 ATG4CQ96DT6 458 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 TM6SF1Q9BZW5 370 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 GPCPD1Q9NPB8 672 aa15.46■□□□□ 0.07
GTF3A-209ENST00000640289 CCDC69A6NI79 296 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 GPR25O00155 361 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 LIFRP42702 1097 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 RAB11FIP4Q86YS3 637 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 ANKRD13CQ8N6S4 541 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 PAGR1Q9BTK6 254 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 PPP1R9AQ9ULJ8 1098 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
GTF3A-209ENST00000640289 CNMDO75829 334 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
GTF3A-209ENST00000640289 BCRP11274 1271 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 RXRAP19793 462 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 SLC16A2P36021 539 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 FGD1P98174 961 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 TROAPQ12815 778 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 IKQ13123 557 aaPredicted RBP15.44■□□□□ 0.06
GTF3A-209ENST00000640289 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 NUP133Q8WUM0 1156 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 BRF1Q92994 677 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 BTBD7Q9P203 1132 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 FEM1BQ9UK73 627 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 BRPF3Q9ULD4 1205 aa15.44■□□□□ 0.06
GTF3A-209ENST00000640289 GCLCP48506 637 aaPredicted RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 CTCFP49711 727 aaPredicted RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 RBM25P49756 843 aaKnown RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 STAT2P52630 851 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 LBX1P52954 281 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 APOBRQ0VD83 1088 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 TOB2Q14106 344 aaPredicted RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 Q3C1V9 767 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 LBX2Q6XYB7 198 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 SGMS1Q86VZ5 419 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 ZNF296Q8WUU4 475 aaPredicted RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 KIF2CQ99661 725 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
GTF3A-209ENST00000640289 MAD2L2Q9UI95 211 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
GTF3A-209ENST00000640289 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 VWA5AO00534 786 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 DDAH1O94760 285 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
GTF3A-209ENST00000640289 SNAP25P60880 206 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 SP3Q02447 781 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 GRM4Q14833 912 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms