RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RAB21Q9UL25 225 aa16.47■□□□□ 0.23
CLN6-215ENST00000636674 MAP2K7O14733 419 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 CAMTA2O94983 1202 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 CASP14P31944 242 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 STX17P56962 302 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 PDXDC2PQ6P474 469 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 IRX2Q9BZI1 471 aaPredicted RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 KIAA1551Q9HCM1 1747 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 PRDM1O75626 825 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 FXR1P51114 621 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLN6-215ENST00000636674 KRT31Q15323 416 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 GNL3LQ9NVN8 582 aaKnown RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
CLN6-215ENST00000636674 CTNND2Q9UQB3 1225 aa16.46■□□□□ 0.23
CLN6-215ENST00000636674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.237e-6■■■■■ 33.6
CLN6-215ENST00000636674 ORC4O43929 436 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 CASP1P29466 404 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 PTGDRQ13258 359 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 LONRF2Q1L5Z9 754 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 ANKZF1Q9H8Y5 726 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 CTAGE9A4FU28 777 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 SMYD4Q8IYR2 804 aaPredicted RBP16.45■□□□□ 0.22
CLN6-215ENST00000636674 TXLNBQ8N3L3 684 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 ABHD10Q9NUJ1 306 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
CLN6-215ENST00000636674 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
CLN6-215ENST00000636674 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
CLN6-215ENST00000636674 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
CLN6-215ENST00000636674 PAK1Q13153 545 aa16.44■□□□□ 0.22
CLN6-215ENST00000636674 ZNF174Q15697 407 aa16.44■□□□□ 0.22
CLN6-215ENST00000636674 WHAMMP3Q1A5X7 153 aa16.44■□□□□ 0.22
CLN6-215ENST00000636674 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
CLN6-215ENST00000636674 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
CLN6-215ENST00000636674 PSD3Q9NYI0 1048 aa16.44■□□□□ 0.22
CLN6-215ENST00000636674 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
CLN6-215ENST00000636674 SMIM22K7EJ46 135 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 ERVK-24P63145 666 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 ZNF569Q5MCW4 686 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 CYP26C1Q6V0L0 522 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 CPLX3Q8WVH0 158 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 PDS5AQ29RF7 1337 aaKnown RBP16.43■□□□□ 0.22
CLN6-215ENST00000636674 A0A0U1RQJ8 604 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 EXOC5O00471 708 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 N4BP3O15049 544 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
CLN6-215ENST00000636674 TUBBP07437 444 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 SCG2P13521 617 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 ARHGAP25P42331 645 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 GPS2Q13227 327 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 DDB1Q16531 1140 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
CLN6-215ENST00000636674 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
CLN6-215ENST00000636674 ATRIPQ8WXE1 791 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 MTRQ99707 1265 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 NAPGQ99747 312 aaPredicted RBP16.43■□□□□ 0.22
CLN6-215ENST00000636674 SBF2Q86WG5 1849 aa16.43■□□□□ 0.22
CLN6-215ENST00000636674 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
CLN6-215ENST00000636674 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 CRKLP46109 303 aaKnown RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 PFKFB3Q16875 520 aaPredicted RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 TCP11X2Q5H9J9 407 aa16.42■□□□□ 0.22
CLN6-215ENST00000636674 BEND6Q5SZJ8 279 aaPredicted RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
CLN6-215ENST00000636674 SLC35F6Q8N357 371 aa16.42■□□□□ 0.22
CLN6-215ENST00000636674 SRBD1Q8N5C6 995 aaKnown RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 COL5A3P25940 1745 aaPredicted RBP16.42■□□□□ 0.22
CLN6-215ENST00000636674 NT5C2P49902 561 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 KIF4BQ2VIQ3 1234 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 ZNF384Q8TF68 577 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 EXOC4Q96A65 974 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 KCNJ18B7U540 433 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 ERLIN1O75477 346 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
CLN6-215ENST00000636674 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
CLN6-215ENST00000636674 KCNJ12Q14500 433 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 IL17AQ16552 155 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 ACRBPQ8NEB7 543 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 NELFBQ8WX92 580 aa16.41■□□□□ 0.22
CLN6-215ENST00000636674 NIP7Q9Y221 180 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLN6-215ENST00000636674 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
CLN6-215ENST00000636674 CALML3P27482 149 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 GYG1P46976 350 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 AMPD2Q01433 879 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms