RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ZNF287Q9HBT7 754 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 MTMR4Q9NYA4 1195 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 CTNNA3Q9UI47 895 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 GABRQQ9UN88 632 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 IVNS1ABPQ9Y6Y0 642 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 HSPA8P11142 646 aaKnown RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 CALML3P27482 149 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 GABPAQ06546 454 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 TRIM32Q13049 653 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 KIF22Q14807 665 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 WTAPQ15007 396 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FOXD4L5Q5VV16 416 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 SNRNP48Q6IEG0 339 aaKnown RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 DPP9Q86TI2 863 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FCHSD1Q86WN1 690 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 ENAHQ8N8S7 591 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 FOXD4L4Q8WXT5 416 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 LENG1Q96BZ8 264 aaPredicted RBP5.41□□□□□ -1.54
SYCP1-210ENST00000618516 DDX11Q96FC9 970 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 PKD2L1Q9P0L9 805 aa5.41□□□□□ -1.54
SYCP1-210ENST00000618516 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 PITPNM1O00562 1244 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 CA12O43570 354 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 ZBTB48P10074 688 aaPredicted RBP5.4□□□□□ -1.54
SYCP1-210ENST00000618516 IBSPP21815 317 aaPredicted RBP5.4□□□□□ -1.54
SYCP1-210ENST00000618516 CTGFP29279 349 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 CYP2C19P33261 490 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 FLT3LGP49771 235 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 NEK4P51957 841 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 CCL14Q16627 93 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 SLC9C1Q4G0N8 1177 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 FASTKD5Q7L8L6 764 aaKnown RBP5.4□□□□□ -1.54
SYCP1-210ENST00000618516 NECAB1Q8N987 351 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 NCOA7Q8NI08 942 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 PARK7Q99497 189 aaKnown RBP5.4□□□□□ -1.54
SYCP1-210ENST00000618516 LSG1Q9H089 658 aaKnown RBP5.4□□□□□ -1.54
SYCP1-210ENST00000618516 RIPK3Q9Y572 518 aa5.4□□□□□ -1.54
SYCP1-210ENST00000618516 ATRNL1Q5VV63 1379 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 TLR2O60603 784 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 REC8O95072 547 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 ATP2B1P20020 1258 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 OSBPP22059 807 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 HOXA13P31271 388 aaPredicted RBP5.4□□□□□ -1.55
SYCP1-210ENST00000618516 MTFR1Q15390 333 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 TATDN1Q6P1N9 297 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 ANKRD35Q8N283 1001 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 GPKOWQ92917 476 aaPredicted RBP eCLIP5.4□□□□□ -1.55
SYCP1-210ENST00000618516 PHKBQ93100 1093 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 PGBD1Q96JS3 809 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 TRIM47Q96LD4 638 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 GOPCQ9HD26 462 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 BTBD7Q9P203 1132 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 SWAP70Q9UH65 585 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 PTCH2Q9Y6C5 1203 aa5.4□□□□□ -1.55
SYCP1-210ENST00000618516 KLF18A0A0U1RQI7 1052 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 GOLGA8BA8MQT2 603 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 FKTNO75072 461 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 CFBP00751 764 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 BMP3P12645 472 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 ERCC3P19447 782 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 GUCY1B3Q02153 619 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 SART3Q15020 963 aaKnown RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 RNF20Q5VTR2 975 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 BLOC1S2Q6QNY1 142 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 Q6ZUG5 572 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 ZSCAN10Q96SZ4 725 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 MCOLN1Q9GZU1 580 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 RNF41Q9H4P4 317 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 VCPKMTQ9H867 229 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 GJB4Q9NTQ9 266 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 AGTPBP1Q9UPW5 1226 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 TNRC18O15417 2968 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 C5orf42Q9H799 3197 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 TULP1O00294 542 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 PLEKHA8P1O95397 391 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 ADD1P35611 737 aaKnown RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 STAT2P52630 851 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 IRX5P78411 483 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 GPAT2Q6NUI2 795 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 COA7Q96BR5 231 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 SPDYE16A6NNV3 312 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 COG2Q14746 738 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 GJC2Q5T442 439 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 MAP4K1Q92918 833 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 VTI1AQ96AJ9 217 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 CCDC17Q96LX7 622 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 DSCC1Q9BVC3 393 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 RNF208Q9H0X6 261 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 UPF2Q9HAU5 1272 aaKnown RBP5.39□□□□□ -1.55
SYCP1-210ENST00000618516 RBPJLQ9UBG7 517 aa5.39□□□□□ -1.55
SYCP1-210ENST00000618516 ZNF112Q9UJU3 913 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms