RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SIGLEC6O43699 453 aa8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 LTKP29376 864 aa8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 SNW1Q13573 536 aaKnown RBP8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 TMC3Q7Z5M5 1100 aa8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 PRDM14Q9GZV8 571 aa8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 C9IYK1 514 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 EGR3Q06889 387 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 AUHQ13825 339 aaKnown RBP8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 C7orf61Q8IZ16 206 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 ZNF655Q8N720 491 aaPredicted RBP8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 PHAXQ9H814 394 aaKnown RBP8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 SLAMF8Q9P0V8 285 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 ZNF214Q9UL59 606 aaPredicted RBP8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 CTNND2Q9UQB3 1225 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 PCDHA11Q9Y5I1 949 aa8.2□□□□□ -1.1
SCAMP1-205ENST00000614488 A0A1W2PQH9 124 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 PAPLNO95428 1278 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 GDNFP39905 211 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 CASP7P55210 303 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 SLC43A3Q8NBI5 491 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
SCAMP1-205ENST00000614488 PRAMEF1O95521 474 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 ARID5AQ03989 594 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 TDRD10Q5VZ19 366 aaKnown RBP8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 CHST7Q9NS84 486 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 C19orf73Q9NVV2 129 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 TMEM59LQ9UK28 342 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 FBXL21Q9UKT6 434 aa8.18□□□□□ -1.1
SCAMP1-205ENST00000614488 SHOXO15266 292 aa8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 FGRP09769 529 aa8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 TEKQ02763 1124 aa8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 FAM169BQ8N8A8 192 aa8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
SCAMP1-205ENST00000614488 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 RALGPS1Q5JS13 557 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 AXDND1Q5T1B0 1012 aaPredicted RBP8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 LINC00116Q8NCU8 138 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 ASIC4Q96FT7 647 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 GMLQ99445 158 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 GFOD1Q9NXC2 390 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 ZNF281Q9Y2X9 895 aa8.16□□□□□ -1.1
SCAMP1-205ENST00000614488 AFMP43652 599 aa8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 PCBP3P57721 371 aaKnown RBP8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 ZC3H6P61129 1189 aaKnown RBP8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 PPP2R5EQ16537 467 aa8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 TNNI3KQ59H18 835 aa8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 DCAF15Q66K64 600 aa8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
SCAMP1-205ENST00000614488 PAX4O43316 350 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 TP53P04637 393 aaPredicted RBP8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 ZGLP1P0C6A0 271 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 SLC7A5Q01650 507 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 DUSP4Q13115 394 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 GNPTABQ3T906 1256 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 GP6Q9HCN6 339 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 TCFL5Q9UL49 500 aa8.14□□□□□ -1.11
SCAMP1-205ENST00000614488 RAC2P15153 192 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 CD247P20963 164 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 ENDOUP21128 410 aaKnown RBP8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 BMP8BP34820 402 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 PDZD8Q8NEN9 1154 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 HAUS7Q99871 368 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 DSCC1Q9BVC3 393 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 ADAMTS10Q9H324 1103 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 FHOD1Q9Y613 1164 aa8.13□□□□□ -1.11
SCAMP1-205ENST00000614488 A0A087WZG4 1122 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 SSU72P8A0A1W2PR75 194 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 SMAD7O15105 426 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 HPXP02790 462 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 GSNP06396 782 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 SYPP08247 313 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 ITGA4P13612 1032 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 CTSKP43235 329 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 ZSWIM9Q86XI8 627 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 KLHL6Q8WZ60 621 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 FAM86C1Q9NVL1 165 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 MINPP1Q9UNW1 487 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 ZNF451Q9Y4E5 1061 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 MRVI1Q9Y6F6 885 aa8.12□□□□□ -1.11
SCAMP1-205ENST00000614488 ZNF205O95201 554 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 HK2P52789 917 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 ZNF445P59923 1031 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 NOL9Q5SY16 702 aaKnown RBP8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 VHLLQ6RSH7 139 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms