RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PIBF1Q8WXW3 757 aa20.78■□□□□ 0.92
VRK3-225ENST00000601912 RRP36Q96EU6 259 aaKnown RBP20.78■□□□□ 0.92
VRK3-225ENST00000601912 GPCPD1Q9NPB8 672 aa20.78■□□□□ 0.92
VRK3-225ENST00000601912 CYTH3O43739 400 aa20.77■□□□□ 0.92
VRK3-225ENST00000601912 MMP1P03956 469 aa20.77■□□□□ 0.92
VRK3-225ENST00000601912 KIF23Q02241 960 aaPredicted RBP20.77■□□□□ 0.92
VRK3-225ENST00000601912 GOPCQ9HD26 462 aa20.77■□□□□ 0.92
VRK3-225ENST00000601912 SEC63Q9UGP8 760 aaKnown RBP20.77■□□□□ 0.92
VRK3-225ENST00000601912 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.92
VRK3-225ENST00000601912 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
VRK3-225ENST00000601912 TMX2Q9Y320 296 aa20.77■□□□□ 0.92
VRK3-225ENST00000601912 BAZ2BQ9UIF8 2168 aaKnown RBP20.77■□□□□ 0.91
VRK3-225ENST00000601912 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.91
VRK3-225ENST00000601912 PRAMEF18Q5VWM3 479 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 ATL3Q6DD88 541 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 FAM173BQ6P4H8 233 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 USP48Q86UV5 1035 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 GMCL1Q96IK5 515 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 ZNF396Q96N95 335 aaPredicted RBP20.77■□□□□ 0.91
VRK3-225ENST00000601912 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 VPS54Q9P1Q0 977 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 CFAP45Q9UL16 551 aa20.77■□□□□ 0.91
VRK3-225ENST00000601912 A0A1W2PRG0 241 aa20.76■□□□□ 0.91
VRK3-225ENST00000601912 SCAND2PQ9GZW5 306 aaPredicted RBP20.76■□□□□ 0.91
VRK3-225ENST00000601912 VAT1LQ9HCJ6 419 aa20.76■□□□□ 0.91
VRK3-225ENST00000601912 BRMS1Q9HCU9 246 aa20.76■□□□□ 0.91
VRK3-225ENST00000601912 SH3GLB2Q9NR46 395 aa20.76■□□□□ 0.91
VRK3-225ENST00000601912 KCNJ14Q9UNX9 436 aa20.76■□□□□ 0.91
VRK3-225ENST00000601912 NDUFB10O96000 172 aa20.75■□□□□ 0.91
VRK3-225ENST00000601912 SLC35G1Q2M3R5 365 aa20.75■□□□□ 0.91
VRK3-225ENST00000601912 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
VRK3-225ENST00000601912 KCTD1Q719H9 257 aa20.75■□□□□ 0.91
VRK3-225ENST00000601912 FAM177A1Q8N128 213 aaPredicted RBP20.75■□□□□ 0.91
VRK3-225ENST00000601912 FOXP1Q9H334 677 aaPredicted RBP20.75■□□□□ 0.91
VRK3-225ENST00000601912 CPVLQ9H3G5 476 aa20.75■□□□□ 0.91
VRK3-225ENST00000601912 ZNF112Q9UJU3 913 aa20.75■□□□□ 0.91
VRK3-225ENST00000601912 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 FIBPO43427 364 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 U2AF2P26368 475 aaKnown RBP eCLIP20.74■□□□□ 0.91
VRK3-225ENST00000601912 ECE1P42892 770 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 KRT26Q7Z3Y9 468 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
VRK3-225ENST00000601912 DIS3L2Q8IYB7 885 aaKnown RBP20.74■□□□□ 0.91
VRK3-225ENST00000601912 ACER1Q8TDN7 264 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 WRNIP1Q96S55 665 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 PHF20Q9BVI0 1012 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 TAF1DQ9H5J8 278 aaPredicted RBP20.74■□□□□ 0.91
VRK3-225ENST00000601912 LMBRD1Q9NUN5 540 aa20.74■□□□□ 0.91
VRK3-225ENST00000601912 POLR2AP24928 1970 aaKnown RBP20.74■□□□□ 0.91
VRK3-225ENST00000601912 BMP3P12645 472 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 NLRP5P59047 1200 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 TMEM87AQ8NBN3 555 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 CCDC148Q8NFR7 591 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 GDPD2Q9HCC8 539 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 SCN4AP35499 1836 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 TCHHQ07283 1943 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 KIF28PB7ZC32 967 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 CALML3P27482 149 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 INPP5BP32019 993 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 KRT2P35908 639 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 HEATR3Q7Z4Q2 680 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 SCYL3Q8IZE3 742 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 CCDC12Q8WUD4 166 aaPredicted RBP20.73■□□□□ 0.91
VRK3-225ENST00000601912 PIGSQ96S52 555 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 PICK1Q9NRD5 415 aa20.73■□□□□ 0.91
VRK3-225ENST00000601912 TFIP11Q9UBB9 837 aaKnown RBP20.73■□□□□ 0.91
VRK3-225ENST00000601912 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 hCG_1984214I3L0E3 225 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 TRAK2O60296 914 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
VRK3-225ENST00000601912 NOSTRINQ8IVI9 506 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 ADGRF4Q8IZF3 695 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 ZNF713Q8N859 430 aaPredicted RBP20.72■□□□□ 0.91
VRK3-225ENST00000601912 FEZ1Q99689 392 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 ANP32EQ9BTT0 268 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 VCPKMTQ9H867 229 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 BARHL2Q9NY43 387 aa20.72■□□□□ 0.91
VRK3-225ENST00000601912 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.72■□□□□ 0.91
VRK3-225ENST00000601912 ADM5C9JUS6 153 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 MYSM1Q5VVJ2 828 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
VRK3-225ENST00000601912 KLRG1Q96E93 195 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 SPATA32Q96LK8 384 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 ATAD5Q96QE3 1844 aa20.71■□□□□ 0.91
VRK3-225ENST00000601912 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 PPP1R12BO60237 982 aaPredicted RBP20.7■□□□□ 0.91
VRK3-225ENST00000601912 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.91
VRK3-225ENST00000601912 NF2P35240 595 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 SLC16A2P36021 539 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 IKQ13123 557 aaPredicted RBP20.7■□□□□ 0.91
VRK3-225ENST00000601912 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 GALNT17Q6IS24 598 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 SPICE1Q8N0Z3 855 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.91
VRK3-225ENST00000601912 TMEM232C9JQI7 657 aa20.7■□□□□ 0.9
VRK3-225ENST00000601912 STXBP3O00186 592 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms