RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SEZ6LQ9BYH1 1024 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 IL23AQ9NPF7 189 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
SMG1-216ENST00000569122 MYH13Q9UKX3 1938 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 NCOR1O75376 2440 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 A0A0U1RQG5 324 aaPredicted RBP10.56□□□□□ -0.72
SMG1-216ENST00000569122 GRXCR1A8MXD5 290 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 ADAMTS4O75173 837 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 DUSP11O75319 330 aaKnown RBP10.56□□□□□ -0.72
SMG1-216ENST00000569122 FLOT1O75955 427 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 CSF2RAP15509 400 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 CYP7A1P22680 504 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 CDK7P50613 346 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 KCNA10Q16322 511 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 C16orf59Q7L2K0 433 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
SMG1-216ENST00000569122 KLHDC9Q8NEP7 349 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 ZNF512BQ96KM6 892 aaPredicted RBP10.56□□□□□ -0.72
SMG1-216ENST00000569122 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 GPR108Q9NPR9 543 aa10.56□□□□□ -0.72
SMG1-216ENST00000569122 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 ARVCFO00192 962 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 MPHOSPH10O00566 681 aaKnown RBP10.55□□□□□ -0.72
SMG1-216ENST00000569122 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
SMG1-216ENST00000569122 ZNF865P0CJ78 1059 aaPredicted RBP10.55□□□□□ -0.72
SMG1-216ENST00000569122 POU3F3P20264 500 aaPredicted RBP10.55□□□□□ -0.72
SMG1-216ENST00000569122 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
SMG1-216ENST00000569122 ZNF792Q3KQV3 632 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 PPP2R2DQ66LE6 453 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 MICALL1Q8N3F8 863 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
SMG1-216ENST00000569122 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
SMG1-216ENST00000569122 CYP2E1P05181 493 aaPredicted RBP10.54□□□□□ -0.72
SMG1-216ENST00000569122 CT47B1P0C2W7 299 aaPredicted RBP10.54□□□□□ -0.72
SMG1-216ENST00000569122 STAT3P40763 770 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 SEPT2Q15019 361 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 TMEM179Q6ZVK1 233 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 ADGRA1Q86SQ6 560 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 RIOX2Q8IUF8 465 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 NECAB3Q96P71 396 aaPredicted RBP10.54□□□□□ -0.72
SMG1-216ENST00000569122 EPHX3Q9H6B9 360 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 PCDHA11Q9Y5I1 949 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 RLFQ13129 1914 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
SMG1-216ENST00000569122 CABYRO75952 493 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 ASGR1P07306 291 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
SMG1-216ENST00000569122 ACRP10323 421 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 GUCY1A2P33402 732 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 SHMT1P34896 483 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 DYNLL1P63167 89 aaKnown RBP10.53□□□□□ -0.72
SMG1-216ENST00000569122 TMEM132BQ14DG7 1078 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
SMG1-216ENST00000569122 ALYREFQ86V81 257 aaKnown RBP10.53□□□□□ -0.72
SMG1-216ENST00000569122 HLA-CQ95604 372 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 MEIS3Q99687 375 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 SWAP70Q9UH65 585 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 NOB1Q9ULX3 412 aaKnown RBP10.53□□□□□ -0.72
SMG1-216ENST00000569122 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
SMG1-216ENST00000569122 A0A1W2PRG0 241 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 ANP32CO43423 234 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 ZEB2O60315 1214 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 IDH1O75874 414 aaKnown RBP10.52□□□□□ -0.73
SMG1-216ENST00000569122 GNAI2P04899 355 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 PGK2P07205 417 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 PFKMP08237 780 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 TAL1P17542 331 aaPredicted RBP10.52□□□□□ -0.73
SMG1-216ENST00000569122 PLCD1P51178 756 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 TFF2Q03403 129 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 GABPAQ06546 454 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 TMEM67Q5HYA8 995 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 MAMDC4Q6UXC1 1216 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 ZNF467Q7Z7K2 595 aaPredicted RBP10.52□□□□□ -0.73
SMG1-216ENST00000569122 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 MIGA1Q8NAN2 632 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 DDX11Q96FC9 970 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 HIPK3Q9H422 1215 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 VCPKMTQ9H867 229 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
SMG1-216ENST00000569122 ADAMTS5Q9UNA0 930 aa10.52□□□□□ -0.73
SMG1-216ENST00000569122 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 PRR33A8MZF0 331 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 PI4K2BG5E9Z4 385 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 SMIM22K7EJ46 135 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 TLL1O43897 1013 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 ATP2A2P16615 1042 aaKnown RBP10.51□□□□□ -0.73
SMG1-216ENST00000569122 ZAP70P43403 619 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 KCNQ1P51787 676 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 GJA9P57773 515 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 ICA1Q05084 483 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
SMG1-216ENST00000569122 ACVR2BQ13705 512 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms