RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 GLRX3O76003 335 aaKnown RBP12.46□□□□□ -0.41
LINC00564-201ENST00000567258 TFRCP02786 760 aaKnown RBP12.46□□□□□ -0.41
LINC00564-201ENST00000567258 INHAP05111 366 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 MAPK4P31152 587 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 JAG1P78504 1218 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 SHROOM1Q2M3G4 852 aaPredicted RBP12.46□□□□□ -0.41
LINC00564-201ENST00000567258 DPF3Q92784 378 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 KIAA1683Q9H0B3 1180 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.41
LINC00564-201ENST00000567258 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
LINC00564-201ENST00000567258 HMGCRP04035 888 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 SHMT1P34896 483 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 ERVK-24P63145 666 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
LINC00564-201ENST00000567258 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
LINC00564-201ENST00000567258 SOCS4Q8WXH5 440 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 UNC93B1Q9H1C4 597 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 ARHGEF10LQ9HCE6 1279 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
LINC00564-201ENST00000567258 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 ERC2O15083 957 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 SGPL1O95470 568 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 SEPT2Q15019 361 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 TMEM179Q6ZVK1 233 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
LINC00564-201ENST00000567258 GFRA3O60609 400 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 FARP2O94887 1054 aaPredicted RBP12.43□□□□□ -0.42
LINC00564-201ENST00000567258 ZFYP08048 801 aaPredicted RBP12.43□□□□□ -0.42
LINC00564-201ENST00000567258 VCAM1P19320 739 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 CYP2B6P20813 491 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 GABPAQ06546 454 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 PLEKHH3Q7Z736 793 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 DEFB118Q96PH6 123 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 RPAP3Q9H6T3 665 aaPredicted RBP12.43□□□□□ -0.42
LINC00564-201ENST00000567258 HMX1Q9NP08 348 aaPredicted RBP12.43□□□□□ -0.42
LINC00564-201ENST00000567258 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 RBPJLQ9UBG7 517 aa12.43□□□□□ -0.42
LINC00564-201ENST00000567258 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 USP17L21D6R901 530 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 PRKAB2O43741 272 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 RGS2P41220 211 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 DYNLL2Q96FJ2 89 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 TXNRD2Q9NNW7 524 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
LINC00564-201ENST00000567258 NR2E3Q9Y5X4 410 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
LINC00564-201ENST00000567258 MYH4Q9Y623 1939 aa12.42□□□□□ -0.42
LINC00564-201ENST00000567258 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 RPTORQ8N122 1335 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 LCE2BO14633 110 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 RAD21O60216 631 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 APPP05067 770 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 CYP2D6P10635 497 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 GNAT2P19087 354 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 CDK8P49336 464 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 ICA1Q05084 483 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 COG2Q14746 738 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 LPAR1Q92633 364 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 YTHDC1Q96MU7 727 aaKnown RBP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 PUS7LQ9H0K6 701 aaKnown RBP12.41□□□□□ -0.42
LINC00564-201ENST00000567258 ZNF287Q9HBT7 754 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 GJD2Q9UKL4 321 aa12.41□□□□□ -0.42
LINC00564-201ENST00000567258 CEP290O15078 2479 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 RNF113AO15541 343 aaKnown RBP12.4□□□□□ -0.42
LINC00564-201ENST00000567258 GUCY1A2P33402 732 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 NBR1Q14596 966 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 TSR1Q2NL82 804 aaKnown RBP12.4□□□□□ -0.42
LINC00564-201ENST00000567258 Q3C1V9 767 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 APPBP2Q92624 585 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 APBA2Q99767 749 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 KANSL2Q9H9L4 492 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 MKNK2Q9HBH9 465 aa12.4□□□□□ -0.42
LINC00564-201ENST00000567258 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms