RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 KLRC3Q07444 240 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 TTC14Q96N46 770 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 CFHR5Q9BXR6 569 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 WTAPQ15007 396 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 SLFN13Q68D06 897 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
AC009163.3-201ENST00000563554 ZNF236Q9UL36 1845 aa16.52■□□□□ 0.23
AC009163.3-201ENST00000563554 FLOT1O75955 427 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 CPA1P15085 419 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 SEC23AQ15436 765 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 CCDC96Q2M329 555 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 LCTP09848 1927 aa16.51■□□□□ 0.23
AC009163.3-201ENST00000563554 WDR19Q8NEZ3 1342 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 MCM3APO60318 1980 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 TLR2O60603 784 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 HSPA8P11142 646 aaKnown RBP16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 BMP3P12645 472 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 PSMA5P28066 241 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 SLC1A4P43007 532 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 HERVK_113P62684 666 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 CPA4Q9UI42 421 aa16.5■□□□□ 0.23
AC009163.3-201ENST00000563554 SPDYE16A6NNV3 312 aaPredicted RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 ANKS1AQ92625 1134 aa16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
AC009163.3-201ENST00000563554 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 GPR25O00155 361 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 PDHBP11177 359 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 STAT2P52630 851 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 FGD1P98174 961 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
AC009163.3-201ENST00000563554 CCDC69A6NI79 296 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 LBX1P52954 281 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 ANAPC15P60006 121 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 COG2Q14746 738 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 IGDCC4Q8TDY8 1250 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
AC009163.3-201ENST00000563554 FAM110CQ1W6H9 321 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
AC009163.3-201ENST00000563554 FKTNO75072 461 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 BCRP11274 1271 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 LIFRP42702 1097 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 SP3Q02447 781 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 SLC35G1Q2M3R5 365 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
AC009163.3-201ENST00000563554 NOM1Q5C9Z4 860 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms