RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
ACTN1-219ENST00000556432 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 ARHGEF10LQ9HCE6 1279 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
ACTN1-219ENST00000556432 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 APBB1O00213 710 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 BCAR3O75815 825 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 IGFBP4P22692 258 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 ICA1Q05084 483 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.29
ACTN1-219ENST00000556432 POLA2Q14181 598 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 CCDC85BQ15834 202 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-219ENST00000556432 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 CLEC10AQ8IUN9 316 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 UHRF1Q96T88 793 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-219ENST00000556432 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.293e-25■■■□□ 14.8
ACTN1-219ENST00000556432 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
ACTN1-219ENST00000556432 NAV1Q8NEY1 1877 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 MYO9BQ13459 2157 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 NCOR1O75376 2440 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 RAD21O60216 631 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 TIMP1P01033 207 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 PBX2P40425 430 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 ACLYP53396 1101 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
ACTN1-219ENST00000556432 EVX2Q03828 476 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 GABPAQ06546 454 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 TMEM132BQ14DG7 1078 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 VTI1AQ96AJ9 217 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 FAM122AQ96E09 287 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
ACTN1-219ENST00000556432 GRXCR1A8MXD5 290 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 AKNAD1Q5T1N1 836 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 SSH3Q8TE77 659 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
ACTN1-219ENST00000556432 TSEN34Q9BSV6 310 aaKnown RBP16.87■□□□□ 0.29
ACTN1-219ENST00000556432 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
ACTN1-219ENST00000556432 WDR46O15213 610 aaKnown RBP16.86■□□□□ 0.29
ACTN1-219ENST00000556432 PLA2G5P39877 138 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 KCNA10Q16322 511 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 MFSD5Q6N075 450 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-219ENST00000556432 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-219ENST00000556432 VCPKMTQ9H867 229 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 MSRAQ9UJ68 235 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 ZHX1Q9UKY1 873 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-219ENST00000556432 MROH7Q68CQ1 1323 aa16.86■□□□□ 0.29
ACTN1-219ENST00000556432 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-219ENST00000556432 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 ZNF865P0CJ78 1059 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-219ENST00000556432 CYP2D6P10635 497 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 STAT3P40763 770 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 SDR42E1Q8WUS8 393 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 FAM184BQ9ULE4 1060 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 DIS3Q9Y2L1 958 aaKnown RBP16.85■□□□□ 0.29
ACTN1-219ENST00000556432 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 BDP1A6H8Y1 2624 aa16.85■□□□□ 0.29
ACTN1-219ENST00000556432 ZNFX1Q9P2E3 1918 aaKnown RBP16.84■□□□□ 0.29
ACTN1-219ENST00000556432 ACRP10323 421 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 AKR1B1P15121 316 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 CSF2RAP15509 400 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 RAB30Q15771 203 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 PSRC1Q6PGN9 363 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-219ENST00000556432 AACSQ86V21 672 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 TMEM57Q8N5G2 664 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 PPP1R12CQ9BZL4 782 aa16.84■□□□□ 0.29
ACTN1-219ENST00000556432 TSPYL2Q9H2G4 693 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-219ENST00000556432 C6orf222P0C671 652 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-219ENST00000556432 PDE6AP16499 860 aa16.83■□□□□ 0.28
ACTN1-219ENST00000556432 COPB2P35606 906 aa16.83■□□□□ 0.28
ACTN1-219ENST00000556432 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-219ENST00000556432 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
ACTN1-219ENST00000556432 MTIF3Q9H2K0 278 aaKnown RBP16.83■□□□□ 0.28
ACTN1-219ENST00000556432 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
ACTN1-219ENST00000556432 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-219ENST00000556432 PLXNA1Q9UIW2 1896 aa16.83■□□□□ 0.28
ACTN1-219ENST00000556432 ZNF532Q9HCE3 1301 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 VWA5AO00534 786 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 ADGRE1Q14246 886 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms