RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
CDK4-208ENST00000551706 UBXN2AP68543 259 aa20.46■□□□□ 0.87
CDK4-208ENST00000551706 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
CDK4-208ENST00000551706 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
CDK4-208ENST00000551706 MAP4K1Q92918 833 aa20.46■□□□□ 0.87
CDK4-208ENST00000551706 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
CDK4-208ENST00000551706 TACC3Q9Y6A5 838 aa20.46■□□□□ 0.87
CDK4-208ENST00000551706 GREB1LQ9C091 1923 aaPredicted RBP20.46■□□□□ 0.87
CDK4-208ENST00000551706 FMNL1O95466 1100 aaPredicted RBP20.45■□□□□ 0.86
CDK4-208ENST00000551706 HERVK_113P62684 666 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 FAM110CQ1W6H9 321 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 P2RX7Q99572 595 aaKnown RBP20.45■□□□□ 0.86
CDK4-208ENST00000551706 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 MYPNQ86TC9 1320 aa20.45■□□□□ 0.86
CDK4-208ENST00000551706 SPICE1Q8N0Z3 855 aa20.44■□□□□ 0.86
CDK4-208ENST00000551706 KRT23Q9C075 422 aa20.44■□□□□ 0.86
CDK4-208ENST00000551706 TANGO6Q9C0B7 1094 aa20.44■□□□□ 0.86
CDK4-208ENST00000551706 STX8Q9UNK0 236 aa20.44■□□□□ 0.86
CDK4-208ENST00000551706 UNC80Q8N2C7 3258 aa20.44■□□□□ 0.86
CDK4-208ENST00000551706 F5H6K3 240 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 KLRC3Q07444 240 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 DEFB123Q8N688 67 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 ANKRD13CQ8N6S4 541 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
CDK4-208ENST00000551706 ANO2Q9NQ90 1003 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 IL17RBQ9NRM6 502 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 HOXC10Q9NYD6 342 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
CDK4-208ENST00000551706 NEDD4P46934 1319 aa20.43■□□□□ 0.86
CDK4-208ENST00000551706 LAMA4Q16363 1823 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 RAD21O60216 631 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 SGPL1O95470 568 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 NOVP48745 357 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 TRDNQ13061 729 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 COG2Q14746 738 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 CCDC178Q5BJE1 867 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 KIAA1755Q5JYT7 1200 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 LBX2Q6XYB7 198 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 IQCA1Q86XH1 822 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 GMCL1P1Q8NEA9 526 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 TTC14Q96N46 770 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 MORF4L1Q9UBU8 362 aa20.42■□□□□ 0.86
CDK4-208ENST00000551706 NDUFB10O96000 172 aa20.41■□□□□ 0.86
CDK4-208ENST00000551706 CYP21A2P08686 494 aa20.41■□□□□ 0.86
CDK4-208ENST00000551706 LRRC47Q8N1G4 583 aaKnown RBP20.41■□□□□ 0.86
CDK4-208ENST00000551706 STXBP5LQ9Y2K9 1186 aa20.41■□□□□ 0.86
CDK4-208ENST00000551706 B4E1Z4 1266 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 NMT2O60551 498 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 KDM4AO75164 1064 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 FLOT1O75955 427 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 FCGRTP55899 365 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 SLAIN1Q8ND83 568 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 GPRC5AQ8NFJ5 357 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 UNC93B1Q9H1C4 597 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 RABGAP1Q9Y3P9 1069 aa20.4■□□□□ 0.86
CDK4-208ENST00000551706 SPDYE16A6NNV3 312 aaPredicted RBP20.39■□□□□ 0.85
CDK4-208ENST00000551706 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
CDK4-208ENST00000551706 CAPN2P17655 700 aa20.39■□□□□ 0.85
CDK4-208ENST00000551706 PRKCZQ05513 592 aa20.39■□□□□ 0.85
CDK4-208ENST00000551706 MB21D1Q8N884 522 aa20.39■□□□□ 0.85
CDK4-208ENST00000551706 COL25A1Q9BXS0 654 aaPredicted RBP20.39■□□□□ 0.85
CDK4-208ENST00000551706 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.85
CDK4-208ENST00000551706 BMP8BP34820 402 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 ERVK-9P63128 1117 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 ERVK-24P63145 666 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 RNF20Q5VTR2 975 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 SLFN13Q68D06 897 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 Q7L0L9 218 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
CDK4-208ENST00000551706 DGKHQ86XP1 1220 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 GMCL1Q96IK5 515 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 PAGR1Q9BTK6 254 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 ZSWIM5Q9P217 1185 aa20.38■□□□□ 0.85
CDK4-208ENST00000551706 E7EWF7 191 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 TFRCP02786 760 aaKnown RBP20.37■□□□□ 0.85
CDK4-208ENST00000551706 DSG3P32926 999 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 CCNA1P78396 465 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 NECTIN1Q15223 517 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 NCOA7Q8NI08 942 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 GDF15Q99988 308 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 UBAC1Q9BSL1 405 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 TXNRD2Q9NNW7 524 aa20.37■□□□□ 0.85
CDK4-208ENST00000551706 TNPO2O14787 897 aaKnown RBP20.36■□□□□ 0.85
CDK4-208ENST00000551706 REC8O95072 547 aa20.36■□□□□ 0.85
CDK4-208ENST00000551706 BMP3P12645 472 aa20.36■□□□□ 0.85
CDK4-208ENST00000551706 SLC1A4P43007 532 aa20.36■□□□□ 0.85
CDK4-208ENST00000551706 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
CDK4-208ENST00000551706 ZSCAN10Q96SZ4 725 aaPredicted RBP20.36■□□□□ 0.85
CDK4-208ENST00000551706 NUP88Q99567 741 aaPredicted RBP20.36■□□□□ 0.85
CDK4-208ENST00000551706 TMEM47Q9BQJ4 181 aa20.36■□□□□ 0.85
CDK4-208ENST00000551706 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
CDK4-208ENST00000551706 SLC27A2O14975 620 aa20.35■□□□□ 0.85
CDK4-208ENST00000551706 MAPK4P31152 587 aa20.35■□□□□ 0.85
CDK4-208ENST00000551706 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
CDK4-208ENST00000551706 RCSD1Q6JBY9 416 aa20.35■□□□□ 0.85
CDK4-208ENST00000551706 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
CDK4-208ENST00000551706 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms