RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PPP1R3GB7ZBB8 358 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 ONECUT3O60422 494 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 DIXDC1Q155Q3 683 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 CDKAL1Q5VV42 579 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 APTXQ7Z2E3 356 aaKnown RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 RPGRQ92834 1020 aaKnown RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 CD209Q9NNX6 404 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 SAMSN1Q9NSI8 373 aaKnown RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 PHLPP2Q6ZVD8 1323 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 PALM3A6NDB9 673 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 GTPBP6O43824 516 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 TSPY3P0CV98 308 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 TSPY8P0CW00 308 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 CD44P16070 742 aaKnown RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 TGFBRAP1Q8WUH2 860 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 FAM163AQ96GL9 167 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 GJD4Q96KN9 370 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-208ENST00000544327 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
SCARB1-208ENST00000544327 FAM205AQ6ZU69 1335 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 ADAMTS3O15072 1205 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 STX10O60499 249 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 PLCG2P16885 1265 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 RASA1P20936 1047 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 MCM7P33993 719 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 TC2NQ8N9U0 490 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 USP17L3A6NCW0 530 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 USP17L4A6NCW7 530 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 ZSCAN12O43309 604 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 SLU7O95391 586 aaKnown RBP20.11■□□□□ 0.81
SCARB1-208ENST00000544327 ETF1P62495 437 aaKnown RBP20.11■□□□□ 0.81
SCARB1-208ENST00000544327 SLC35G1Q2M3R5 365 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 C16orf86Q6ZW13 317 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 USP17L1Q7RTZ2 530 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 RBM17Q96I25 401 aaKnown RBP20.11■□□□□ 0.81
SCARB1-208ENST00000544327 TMEM47Q9BQJ4 181 aa20.11■□□□□ 0.81
SCARB1-208ENST00000544327 CGNQ9P2M7 1197 aaKnown RBP20.11■□□□□ 0.81
SCARB1-208ENST00000544327 ZNF215Q9UL58 517 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-208ENST00000544327 LTBP1Q14766 1721 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 ST5P78524 1137 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 CTAGE1Q96RT6 745 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 BAG1Q99933 345 aaPredicted RBP20.1■□□□□ 0.81
SCARB1-208ENST00000544327 SPZ1Q9BXG8 430 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 LRRC4BQ9NT99 713 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 GGA1Q9UJY5 639 aa20.1■□□□□ 0.81
SCARB1-208ENST00000544327 FOCADQ5VW36 1801 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
SCARB1-208ENST00000544327 GOLGA6L9A6NEM1 432 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 STXBP3O00186 592 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 CYTH3O43739 400 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 BBOX1O75936 387 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 UFL1O94874 794 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-208ENST00000544327 PBX1P40424 430 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 BTDP43251 543 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 NOVP48745 357 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 WWC2Q6AWC2 1192 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 TYW1BQ6NUM6 668 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 TRIM65Q6PJ69 517 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 SYT10Q6XYQ8 523 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 NEDD1Q8NHV4 660 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 GAKO14976 1311 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 GYS1P13807 737 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 SMARCA1P28370 1054 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 TXLNAP40222 546 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 PPP4R3BQ5MIZ7 849 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 SLF2Q8IX21 1173 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 GPKOWQ92917 476 aaPredicted RBP eCLIP20.09■□□□□ 0.81
SCARB1-208ENST00000544327 MTRQ99707 1265 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 ADD3Q9UEY8 706 aaKnown RBP20.09■□□□□ 0.81
SCARB1-208ENST00000544327 PCDHA6Q9UN73 950 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 PCDHA8Q9Y5H6 950 aa20.09■□□□□ 0.81
SCARB1-208ENST00000544327 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.81
SCARB1-208ENST00000544327 CCDC194A0A1B0GVG4 234 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 LAD1O00515 517 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 CASP1P29466 404 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 SEMA3FQ13275 785 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 HSP90AA4PQ58FG1 418 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 SLC44A5Q8NCS7 719 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 GPR101Q96P66 508 aaPredicted RBP20.08■□□□□ 0.8
SCARB1-208ENST00000544327 PANX2Q96RD6 677 aa20.08■□□□□ 0.8
SCARB1-208ENST00000544327 SERPINB2P05120 415 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 CDK8P49336 464 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 GOLGA8FQ08AF8 430 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 GOLGA8DPQ0D2H9 430 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 RWDD2AQ9UIY3 292 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms