RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
DDX55-209ENST00000542286 XDHP47989 1333 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 RCAN1P53805 252 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
DDX55-209ENST00000542286 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
DDX55-209ENST00000542286 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
DDX55-209ENST00000542286 MXD3Q9BW11 206 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 RIMBP2O15034 1052 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 ZNF18P17022 549 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 DNAI1Q9UI46 699 aa16.77■□□□□ 0.28
DDX55-209ENST00000542286 TULP2O00295 520 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 CAPN2P17655 700 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 BTDP43251 543 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.27
DDX55-209ENST00000542286 INF2Q27J81 1249 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 NT5DC1Q5TFE4 455 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 RGS22Q8NE09 1264 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 TMEM60Q9H2L4 133 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 ZNF446Q9NWS9 450 aa16.77■□□□□ 0.27
DDX55-209ENST00000542286 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.27
DDX55-209ENST00000542286 CALM1P0DP23 149 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 CALM2P0DP24 149 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 CALM3P0DP25 149 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
DDX55-209ENST00000542286 SLC20A2Q08357 652 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 TMEM139Q8IV31 216 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
DDX55-209ENST00000542286 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 ATP2C1P98194 919 aaPredicted RBP16.76■□□□□ 0.27
DDX55-209ENST00000542286 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
DDX55-209ENST00000542286 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
DDX55-209ENST00000542286 SLU7O95391 586 aaKnown RBP16.75■□□□□ 0.27
DDX55-209ENST00000542286 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
DDX55-209ENST00000542286 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 IRX2Q9BZI1 471 aaPredicted RBP16.75■□□□□ 0.27
DDX55-209ENST00000542286 KIAA1551Q9HCM1 1747 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 FAM193AP78312 1265 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 PICALMQ13492 652 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 SBK1Q52WX2 424 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 TC2NQ8N9U0 490 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 SPATA20Q8TB22 786 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 CD209Q9NNX6 404 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 GDAQ9Y2T3 454 aa16.75■□□□□ 0.27
DDX55-209ENST00000542286 PPP2R5BQ15173 497 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 BLIDQ8IZY5 108 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
DDX55-209ENST00000542286 ENOX1Q8TC92 643 aaKnown RBP16.74■□□□□ 0.27
DDX55-209ENST00000542286 LRRC15Q8TF66 581 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 UIMC1Q96RL1 719 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
DDX55-209ENST00000542286 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 PPP1R3GB7ZBB8 358 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 RASA1P20936 1047 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 MEX3CQ5U5Q3 659 aaKnown RBP16.74■□□□□ 0.27
DDX55-209ENST00000542286 SH3RF1Q7Z6J0 888 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
DDX55-209ENST00000542286 C6orf229H3BNL8 230 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 CYP2C19P33261 490 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
DDX55-209ENST00000542286 E2F4Q16254 413 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 MFSD14BQ5SR56 506 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 SBF2Q86WG5 1849 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 SERPINB2P05120 415 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 GYS1P13807 737 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 HNRNPH2P55795 449 aaKnown RBP16.73■□□□□ 0.27
DDX55-209ENST00000542286 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
DDX55-209ENST00000542286 REXO1L1PQ8IX06 675 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 WDR66Q8TBY9 1149 aa16.73■□□□□ 0.27
DDX55-209ENST00000542286 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 SOWAHDA6NJG2 315 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 BAG1Q99933 345 aaPredicted RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 FRMPD2Q68DX3 1309 aaPredicted RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 SPECC1LQ69YQ0 1117 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 PDXDC2PQ6P474 469 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 FERMT2Q96AC1 680 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 PCDHA6Q9UN73 950 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 PCDHA8Q9Y5H6 950 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 KIF5BP33176 963 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 CDK8P49336 464 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms