RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
SMAD3-204ENST00000540846 SNCAIPQ9Y6H5 919 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 TOP1P11387 765 aaKnown RBP14.45□□□□□ -0.1
SMAD3-204ENST00000540846 PRKG1Q13976 671 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 VGLL4Q14135 290 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 CCDC144CPQ8IYA2 1237 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 PNMA1Q8ND90 353 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 CABP5Q9NP86 173 aa14.45□□□□□ -0.1
SMAD3-204ENST00000540846 LOC285556D6RIA3 1793 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 PASKQ96RG2 1323 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-204ENST00000540846 DDAH1O94760 285 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-204ENST00000540846 NF2P35240 595 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 LDLRAD1Q5T700 205 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 LRRC47Q8N1G4 583 aaKnown RBP14.44□□□□□ -0.1
SMAD3-204ENST00000540846 FANCBQ8NB91 859 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 ACER1Q8TDN7 264 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 LEO1Q8WVC0 666 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-204ENST00000540846 PHKBQ93100 1093 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 CLIP2Q9UDT6 1046 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 SYNPO2Q9UMS6 1093 aa14.44□□□□□ -0.1
SMAD3-204ENST00000540846 SNHG28P0DPA3 235 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 PTPRAP18433 802 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 ECE1P42892 770 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 MAP3K9P80192 1104 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 GUCY1B3Q02153 619 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CST9Q5W186 159 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 KAT14Q9H8E8 782 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 TMX2Q9Y320 296 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CALM1P0DP23 149 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CALM2P0DP24 149 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CALM3P0DP25 149 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 IREB2P48200 963 aaKnown RBP14.43□□□□□ -0.1
SMAD3-204ENST00000540846 SSRP1Q08945 709 aaKnown RBP14.43□□□□□ -0.1
SMAD3-204ENST00000540846 KIAA1755Q5JYT7 1200 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 BRAPQ7Z569 592 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CATIPQ7Z7H3 387 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 NBPF11Q86T75 865 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-204ENST00000540846 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 MAP3K14Q99558 947 aa14.43□□□□□ -0.1
SMAD3-204ENST00000540846 RLFQ13129 1914 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 PDHBP11177 359 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 YY1P25490 414 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 MRE11P49959 708 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 GRM4Q14833 912 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 TRIM22Q8IYM9 498 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 GMCL1P1Q8NEA9 526 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 WASF1Q92558 559 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-204ENST00000540846 WDR18Q9BV38 432 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 SLC26A6Q9BXS9 759 aa14.42□□□□□ -0.1
SMAD3-204ENST00000540846 RBM28Q9NW13 759 aaKnown RBP14.42□□□□□ -0.1
SMAD3-204ENST00000540846 TFIP11Q9UBB9 837 aaKnown RBP14.42□□□□□ -0.1
SMAD3-204ENST00000540846 FKBP1BP68106 108 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-204ENST00000540846 FUT2Q10981 343 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 SLC35G1Q2M3R5 365 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 CCDC183Q5T5S1 534 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 ANKRD13AQ8IZ07 590 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 AIFM3Q96NN9 605 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 KIAA1683Q9H0B3 1180 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 GRPEL1Q9HAV7 217 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 GBA2Q9HCG7 927 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-204ENST00000540846 GJB4Q9NTQ9 266 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
SMAD3-204ENST00000540846 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
SMAD3-204ENST00000540846 UNCXA6NJT0 531 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
SMAD3-204ENST00000540846 DEXIO95424 95 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 ATP2B2Q01814 1243 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 KRT40Q6A162 431 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 LRSAM1Q6UWE0 723 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 ARMC9Q7Z3E5 817 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 STAG2Q8N3U4 1231 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 RBM46Q8TBY0 533 aaKnown RBP14.4□□□□□ -0.1
SMAD3-204ENST00000540846 USP28Q96RU2 1077 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-204ENST00000540846 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 PICK1Q9NRD5 415 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
SMAD3-204ENST00000540846 SYCE3A1L190 88 aa14.39□□□□□ -0.11
SMAD3-204ENST00000540846 PALM3A6NDB9 673 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-204ENST00000540846 SPDYE5A6NIY4 337 aa14.39□□□□□ -0.11
SMAD3-204ENST00000540846 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
SMAD3-204ENST00000540846 F5H6K3 240 aa14.39□□□□□ -0.11
SMAD3-204ENST00000540846 TOMM70O94826 608 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms