RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZMYM1Q5SVZ6 1142 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 METTL16Q86W50 562 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 RHOXF2Q9BQY4 288 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MED4Q9NPJ6 270 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 PAG1Q9NWQ8 432 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 NFE2L3Q9Y4A8 694 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 UBR3Q6ZT12 1888 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MAST3O60307 1309 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE15A4D2H0 777 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE9A4FU28 777 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 NEBLO76041 1014 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 PCCAP05165 728 aaPredicted RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 TUBBP07437 444 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE8P0CG41 777 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 HNRNPH1P31943 449 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 PDE4BQ07343 736 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 ZNF569Q5MCW4 686 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 RESP18Q5W5W9 173 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 SHC4Q6S5L8 630 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE6Q86UF2 777 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE4Q8IX94 777 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 FBXL16Q8N461 479 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 ZBTB38Q8NAP3 1195 aaPredicted RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 NAA15Q9BXJ9 866 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 GPR108Q9NPR9 543 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 GPHNQ9NQX3 736 aaPredicted RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 PICK1Q9NRD5 415 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 GJB4Q9NTQ9 266 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 SEPT11Q9NVA2 429 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 PCDHA5Q9Y5H7 936 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 AFF2P51816 1311 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MYO1FO00160 1098 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 KCNQ2O43526 872 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 PRC1O43663 620 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CDC25CP30307 473 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 VSNL1P62760 191 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MTF1Q14872 753 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MAP9Q49MG5 647 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 FKBP15Q5T1M5 1219 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 EFCAB13Q8IY85 973 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 PANX2Q96RD6 677 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 BMP2KQ9NSY1 1161 aaPredicted RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 SEC63Q9UGP8 760 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 RIPOR2Q9Y4F9 1068 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 MAP1BP46821 2468 aaKnown RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 FAM237AA0A1B0GTK4 181 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 UPP2O95045 317 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CYP7A1P22680 504 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 SCARF1Q14162 830 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CCDC152Q4G0S7 254 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 LRCH2Q5VUJ6 765 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CCDC91Q7Z6B0 441 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 FNBP4Q8N3X1 1017 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 NKX2-3Q8TAU0 364 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 AFAP1L1Q8TED9 768 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 SMARCC1Q92922 1105 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CABP5Q9NP86 173 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 KCNH3Q9ULD8 1083 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 SAMM50Q9Y512 469 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 ADGRG1Q9Y653 693 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CAMTA2O94983 1202 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 LDHCP07864 332 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MYBL1P10243 752 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 ZNF18P17022 549 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 ACTN3Q08043 901 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 PLS1Q14651 629 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 KCTD19Q17RG1 926 aaPredicted RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 WHAMMP3Q1A5X7 153 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 LONRF3Q496Y0 759 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 TRAPPC3LQ5T215 181 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MIGA1Q8NAN2 632 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MLKLQ8NB16 471 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 ENOX1Q8TC92 643 aaKnown RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 ALG1Q9BT22 464 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
PROM1-220ENST00000540805 FAM107BQ9H098 131 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 ZNF287Q9HBT7 754 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MAN1B1Q9UKM7 699 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 KIAA1551Q9HCM1 1747 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CACNA1SQ13698 1873 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 RNF113AO15541 343 aaKnown RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 BAG3O95817 575 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CPP00450 1065 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 IDEP14735 1019 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 CDC27P30260 824 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 TIMM10P62072 90 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 SNX1Q13596 522 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 PTPAQ15257 358 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 GPR162Q16538 588 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 RAD9BQ6WBX8 426 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 MMS22LQ6ZRQ5 1243 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 TICAM2Q86XR7 235 aa5.87□□□□□ -1.47
PROM1-220ENST00000540805 TRMT44Q8IYL2 757 aaKnown RBP5.87□□□□□ -1.47
PROM1-220ENST00000540805 SLC35F6Q8N357 371 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms