RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SLFN14P0C7P3 912 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 DESI2Q9BSY9 194 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 ROBO3Q96MS0 1386 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 MTF1Q14872 753 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 ERCC6LQ2NKX8 1250 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
C11orf54-214ENST00000540113 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 BRWD3Q6RI45 1802 aa13.1□□□□□ -0.31
C11orf54-214ENST00000540113 IGSF3O75054 1194 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 SYCP1Q15431 976 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 TGFBRAP1Q8WUH2 860 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 PLIN2Q99541 437 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-214ENST00000540113 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 UFL1O94874 794 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 SERPINB2P05120 415 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-214ENST00000540113 DDR1Q08345 913 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 CUL4BQ13620 913 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-214ENST00000540113 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 FBXO38Q6PIJ6 1188 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 MTRQ99707 1265 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-214ENST00000540113 CTNND2Q9UQB3 1225 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 PPP2R2CQ9Y2T4 447 aa13.09□□□□□ -0.31
C11orf54-214ENST00000540113 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.31
C11orf54-214ENST00000540113 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 A0A0U1RQJ8 604 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 TRIM37O94972 964 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 PPP4CP60510 307 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 NR1I3Q14994 352 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 TRIML1Q8N9V2 468 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 URI1O94763 535 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.32
C11orf54-214ENST00000540113 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
C11orf54-214ENST00000540113 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
C11orf54-214ENST00000540113 KCNJ6P48051 423 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 GSTO1P78417 241 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
C11orf54-214ENST00000540113 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 STX8Q9UNK0 236 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 EP400Q96L91 3159 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 ANKRD31Q8N7Z5 1873 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 SOWAHDA6NJG2 315 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 RXRBP28702 533 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 ST5P78524 1137 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 E2F4Q16254 413 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 RRAGBQ5VZM2 374 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 WDR24Q96S15 920 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 EPC1Q9H2F5 836 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
C11orf54-214ENST00000540113 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.07□□□□□ -0.32
C11orf54-214ENST00000540113 SNED1Q8TER0 1413 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 A0A1B0GTH6 734 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 TSPY3P0CV98 308 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 TSPY8P0CW00 308 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 IL1R1P14778 569 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 ERCC5P28715 1186 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-214ENST00000540113 RBL2Q08999 1139 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 BLIDQ8IZY5 108 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
C11orf54-214ENST00000540113 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms