RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 UBASH3AP57075 661 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 ARID5AQ03989 594 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 FAM83BQ5T0W9 1011 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 RSBN1LQ6PCB5 846 aaPredicted RBP17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 NEK8Q86SG6 692 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 DAGLAQ9Y4D2 1042 aa17.67■□□□□ 0.42
PPFIA1-222ENST00000532504 BIRC3Q13489 604 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 SUGCTQ9HAC7 445 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 KLRK1P26718 216 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 CPVLQ9H3G5 476 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 PNMA2Q9UL42 364 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 BCL9O00512 1426 aa17.66■□□□□ 0.42
PPFIA1-222ENST00000532504 LMNB1P20700 586 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 CETN2P41208 172 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 RNF169Q8NCN4 708 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 TMX1Q9H3N1 280 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 PLSCR1O15162 318 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 TBC1D10CQ8IV04 446 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 FNBP1Q96RU3 617 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 PNMA3Q9UL41 463 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 SH2B2O14492 632 aaPredicted RBP17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 RASSF7Q02833 373 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 FAM160A1Q05DH4 1040 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 CDC37Q16543 378 aaPredicted RBP17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 ELP3Q9H9T3 547 aa17.65■□□□□ 0.42
PPFIA1-222ENST00000532504 UTYO14607 1347 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 CUTAO60888 179 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 ERCC3P19447 782 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 CYP4A11Q02928 519 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 BRPF3Q9ULD4 1205 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 MYO6Q9UM54 1294 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 TBC1D5Q92609 795 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 BICDL2A1A5D9 508 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 SRGNP10124 158 aa17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 NOP2P46087 812 aaKnown RBP17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
PPFIA1-222ENST00000532504 CTR9Q6PD62 1173 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 LEO1Q8WVC0 666 aaPredicted RBP17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 AKR1B10O60218 316 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 SPAG1Q07617 926 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 ADCY5O95622 1261 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 RPL13P26373 211 aaKnown RBP17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 TGFB2P61812 414 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 NELFCDQ8IXH7 590 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
PPFIA1-222ENST00000532504 TYRO3Q06418 890 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 POLLQ9UGP5 575 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 FOSP01100 380 aaPredicted RBP17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 FAM102BQ5T8I3 360 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 OTUD6AQ7L8S5 288 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 TEKT3Q9BXF9 490 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 BLZF1Q9H2G9 400 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 ARGLU1Q9NWB6 273 aaPredicted RBP17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 KIF13AQ9H1H9 1805 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 NEDD4P46934 1319 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 TAF12Q16514 161 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 UBE2SQ16763 222 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 Q3C1V9 767 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 TRMT1Q9NXH9 659 aaKnown RBP17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 AP5M1Q9H0R1 490 aa17.62■□□□□ 0.41
PPFIA1-222ENST00000532504 CHGBP05060 677 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 ZNF70Q9UC06 446 aaPredicted RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 CTNNBL1Q8WYA6 563 aaPredicted RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 LRRC4BQ9NT99 713 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 USO1O60763 962 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 GCNT3O95395 438 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 CAVIN2O95810 425 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 CTNND2Q9UQB3 1225 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 MCTP2Q6DN12 878 aa17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
PPFIA1-222ENST00000532504 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 HMGCS2P54868 508 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 SUGT1Q9Y2Z0 365 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 PLEKHA8P1O95397 391 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms