RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 CDV3Q9UKY7 258 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 PNMA2Q9UL42 364 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 PFASO15067 1338 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 RANBP2P49792 3224 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 SLC30A4O14863 429 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 SRGAP3O43295 1099 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 USP17L8P0C7I0 530 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 RLBP1P12271 317 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 NF2P35240 595 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 SBK1Q52WX2 424 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 PARP9Q8IXQ6 854 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 KIAA2013Q8IYS2 634 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 CLASRPQ8N2M8 674 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 RHPN1Q8TCX5 695 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 FBXW7Q969H0 707 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 LRRCC1Q9C099 1032 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 OSBPL5Q9H0X9 879 aaPredicted RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 MSRAQ9UJ68 235 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 MYH2Q9UKX2 1941 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 TTLL13PA6NNM8 815 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 GLRX3O76003 335 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 ZXDAP98168 799 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 NUCB1Q02818 461 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 SUPT20HL1Q3ZLR7 823 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 CCDC178Q5BJE1 867 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 FAM177A1Q8N128 213 aaPredicted RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 IRX2Q9BZI1 471 aaPredicted RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.44□□□□□ -1.86
MCF2-208ENST00000519895 ANKIB1Q9P2G1 1089 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 HERC5Q9UII4 1024 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 TPRP12270 2363 aaKnown RBP3.44□□□□□ -1.86
MCF2-208ENST00000519895 MROH7-TTC4A0A0A0MT08 1334 aa3.44□□□□□ -1.86
MCF2-208ENST00000519895 SIPA1L1O43166 1804 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 RLFQ13129 1914 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 ADM5C9JUS6 153 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 PSMD14O00487 310 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 FGRP09769 529 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 KCNJ4P48050 445 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 PIP4K2AP48426 406 aaPredicted RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 NOVP48745 357 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 C1orf53Q5VUE5 145 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 CCDC102BQ68D86 513 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 CENPQQ7L2Z9 268 aaPredicted RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 ITPRIPQ8IWB1 547 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 SIRT2Q8IXJ6 389 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 FAM151AQ8WW52 585 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 ANKS1AQ92625 1134 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 CCDC97Q96F63 343 aaPredicted RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 DEFB118Q96PH6 123 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 OCEL1Q9H607 264 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 HELLSQ9NRZ9 838 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 CNOT7Q9UIV1 285 aaKnown RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 HELZ2Q9BYK8 2649 aaKnown RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 DOPEY1Q5JWR5 2465 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 OTOFQ9HC10 1997 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 LOC102724159A0A0B4J2E5 919 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 MYO1BO43795 1136 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 FOXD2O60548 495 aaPredicted RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 TLR2O60603 784 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 C8BP07358 591 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 IGFBP4P22692 258 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 PWP2Q15269 919 aaKnown RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 AOC3Q16853 763 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 DCAF15Q66K64 600 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 SLC4A10Q6U841 1118 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 ANKRD23Q86SG2 305 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 FOXP4Q8IVH2 680 aaPredicted RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 SAMD3Q8N6K7 520 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 NETO1Q8TDF5 533 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 TEKT1Q969V4 418 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 XAGE2Q96GT9 111 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.43□□□□□ -1.86
MCF2-208ENST00000519895 MYOZ2Q9NPC6 264 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 GGA3Q9NZ52 723 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 SWAP70Q9UH65 585 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 ANAPC4Q9UJX5 808 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 NSFL1CQ9UNZ2 370 aaKnown RBP3.43□□□□□ -1.86
MCF2-208ENST00000519895 WDR19Q8NEZ3 1342 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 AK9Q5TCS8 1911 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 NCOR2Q9Y618 2525 aa3.43□□□□□ -1.86
MCF2-208ENST00000519895 DCDC2CA8MYV0 355 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 H0Y858 1186 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 PLA2G6O60733 806 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 FMNL1O95466 1100 aaPredicted RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 BAG3O95817 575 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 KIF4BQ2VIQ3 1234 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 PPM1JQ5JR12 505 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TTLL5Q6EMB2 1281 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 OGFOD1Q8N543 542 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 SPATA5Q8NB90 893 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 FBXO22Q8NEZ5 403 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TANGO6Q9C0B7 1094 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TLR9Q9NR96 1032 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 ATP8A2Q9NTI2 1148 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 ECHDC1Q9NTX5 307 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 ZNF330Q9Y3S2 320 aaPredicted RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 ASTN2O75129 1339 aaPredicted RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 GBF1Q92538 1859 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 VCANP13611 3396 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 GRIN2DO15399 1336 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms