RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
UBE2D3-211ENST00000502404 HOXC10Q9NYD6 342 aa13.47□□□□□ -0.25
UBE2D3-211ENST00000502404 MSCO60682 206 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 PADI6Q6TGC4 694 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 LBX2Q6XYB7 198 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 PORCNQ9H237 461 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 MCM9Q9NXL9 1143 aa13.46□□□□□ -0.25
UBE2D3-211ENST00000502404 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 VCAM1P19320 739 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 KRI1Q8N9T8 703 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 DDRGK1Q96HY6 314 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 GDF15Q99988 308 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 ZBED2Q9BTP6 218 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
UBE2D3-211ENST00000502404 STRNO43815 780 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 PEX10O60683 326 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 PDE6AP16499 860 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 SHMT1P34896 483 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 PLCD1P51178 756 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 COG2Q14746 738 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.261e-12■■■□□ 15.4
UBE2D3-211ENST00000502404 RPAP3Q9H6T3 665 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
UBE2D3-211ENST00000502404 GOLIM4O00461 696 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 HOXC6P09630 235 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 CCL14Q16627 93 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 SIPA1L1O43166 1804 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
UBE2D3-211ENST00000502404 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 APBB1O00213 710 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 CNMDO75829 334 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 CNGA1P29973 690 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 GABPAQ06546 454 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 SEPT2Q15019 361 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 DMRTA1Q5VZB9 504 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 LPAR1Q92633 364 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 UBE2OQ9C0C9 1292 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 MYH1P12882 1939 aa13.42□□□□□ -0.26
UBE2D3-211ENST00000502404 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 COL6A1P12109 1028 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 SYN1P17600 705 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 GRB14Q14449 540 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 DCP1AQ9NPI6 582 aaPredicted RBP13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-211ENST00000502404 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 SHCBP1Q8NEM2 672 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 MROH8Q9H579 483 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 ADGRG1Q9Y653 693 aa13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-211ENST00000502404 PFASO15067 1338 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 ATP5JP18859 108 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 PROX2Q3B8N5 592 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms