RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ASB2Q96Q27 587 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 GAS2L1Q99501 681 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-236ENST00000498808 TINF2Q9BSI4 451 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 PBX4Q9BYU1 374 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 PRDM12Q9H4Q4 367 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 THEGQ9P2T0 379 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 TBX21Q9UL17 535 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 GRXCR1A8MXD5 290 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 ZNF792Q3KQV3 632 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 SIAH1Q8IUQ4 282 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 SPICE1Q8N0Z3 855 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 ADAMTS19Q8TE59 1207 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 EAF2Q96CJ1 260 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-236ENST00000498808 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
HDAC6-236ENST00000498808 DCDC2CA8MYV0 355 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
HDAC6-236ENST00000498808 SLC25A27O95847 323 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 TIMP1P01033 207 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 AKR1A1P14550 325 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 PLA2G5P39877 138 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 ACLYP53396 1101 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 MAP3K12Q12852 859 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 ADGRE1Q14246 886 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 RASIP1Q5U651 963 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-236ENST00000498808 TMEM179Q6ZVK1 233 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 MMP19Q99542 508 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 TSEN34Q9BSV6 310 aaKnown RBP18.97■□□□□ 0.63
HDAC6-236ENST00000498808 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
HDAC6-236ENST00000498808 MFSD5Q6N075 450 aa18.96■□□□□ 0.63
HDAC6-236ENST00000498808 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
HDAC6-236ENST00000498808 VCPKMTQ9H867 229 aa18.96■□□□□ 0.63
HDAC6-236ENST00000498808 MCM9Q9NXL9 1143 aa18.96■□□□□ 0.63
HDAC6-236ENST00000498808 DIS3Q9Y2L1 958 aaKnown RBP18.96■□□□□ 0.63
HDAC6-236ENST00000498808 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
HDAC6-236ENST00000498808 BCAR3O75815 825 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 CYP2D6P10635 497 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 CCSAPQ6IQ19 270 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-236ENST00000498808 TMED8Q6PL24 325 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-236ENST00000498808 CCDC129Q6ZRS4 1044 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 RIOX2Q8IUF8 465 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 KLHDC9Q8NEP7 349 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 UHRF1Q96T88 793 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-236ENST00000498808 ADAMTS5Q9UNA0 930 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
HDAC6-236ENST00000498808 MYH8P13535 1937 aa18.95■□□□□ 0.62
HDAC6-236ENST00000498808 MAGEB6P1A0A0J9YX57 407 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 MYADML2A6NDP7 307 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 MOXD2PA6NHM9 499 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 WDR46O15213 610 aaKnown RBP18.94■□□□□ 0.62
HDAC6-236ENST00000498808 MRPS5P82675 430 aaKnown RBP18.94■□□□□ 0.62
HDAC6-236ENST00000498808 PPIGQ13427 754 aaKnown RBP eCLIP18.94■□□□□ 0.627e-8■■■□□ 17
HDAC6-236ENST00000498808 KCTD2Q14681 263 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 FBXO28Q9NVF7 368 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 CHD9Q3L8U1 2897 aa18.94■□□□□ 0.62
HDAC6-236ENST00000498808 IPO8O15397 1037 aaKnown RBP18.93■□□□□ 0.62
HDAC6-236ENST00000498808 AKR1B1P15121 316 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 CSF2RAP15509 400 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 IRX5P78411 483 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-236ENST00000498808 ICA1Q05084 483 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 CCDC85BQ15834 202 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-236ENST00000498808 KCNA10Q16322 511 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 SDR42E1Q8WUS8 393 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 DYNLL2Q96FJ2 89 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 CRNKL1Q9BZJ0 848 aaKnown RBP18.93■□□□□ 0.62
HDAC6-236ENST00000498808 ARHGEF10LQ9HCE6 1279 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 DCP1AQ9NPI6 582 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-236ENST00000498808 CNPY2Q9Y2B0 182 aa18.93■□□□□ 0.62
HDAC6-236ENST00000498808 ACRP10323 421 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 CDK7P50613 346 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 TMEM57Q8N5G2 664 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 REPS2Q8NFH8 660 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-236ENST00000498808 FAM122AQ96E09 287 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 SH2D4AQ9H788 454 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 C1orf115Q9H7X2 142 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 SWAP70Q9UH65 585 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 ZNF214Q9UL59 606 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-236ENST00000498808 GBF1Q92538 1859 aa18.92■□□□□ 0.62
HDAC6-236ENST00000498808 BDP1A6H8Y1 2624 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 VWA5AO00534 786 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 SNAI1O95863 264 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-236ENST00000498808 PDE6AP16499 860 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 STAT3P40763 770 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 CCDC174Q6PII3 467 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 TCF20Q9UGU0 1960 aaKnown RBP18.91■□□□□ 0.62
HDAC6-236ENST00000498808 ELP1O95163 1332 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 MROH7Q68CQ1 1323 aa18.91■□□□□ 0.62
HDAC6-236ENST00000498808 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-236ENST00000498808 SMIM22K7EJ46 135 aa18.9■□□□□ 0.62
HDAC6-236ENST00000498808 IGFBP4P22692 258 aa18.9■□□□□ 0.62
HDAC6-236ENST00000498808 CST5P28325 142 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-236ENST00000498808 PSRC1Q6PGN9 363 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-236ENST00000498808 LCORLQ8N3X6 602 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms