RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 FAM83BQ5T0W9 1011 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
USP11-212ENST00000497179 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
USP11-212ENST00000497179 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 CYP2C8P10632 490 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 PDHBP11177 359 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 BMP3P12645 472 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 RUFY3Q7L099 469 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 ZFYVE28Q9HCC9 887 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
USP11-212ENST00000497179 RLFQ13129 1914 aa16.92■□□□□ 0.3
USP11-212ENST00000497179 SLC1A4P43007 532 aa16.92■□□□□ 0.3
USP11-212ENST00000497179 HERVK_113P62684 666 aa16.92■□□□□ 0.3
USP11-212ENST00000497179 FBXL16Q8N461 479 aa16.92■□□□□ 0.3
USP11-212ENST00000497179 UPF3BQ9BZI7 483 aaKnown RBP16.92■□□□□ 0.3
USP11-212ENST00000497179 MTMR7Q9Y216 660 aa16.92■□□□□ 0.3
USP11-212ENST00000497179 TLR2O60603 784 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 PLA2G6O60733 806 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 CCDC96Q2M329 555 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 LBX2Q6XYB7 198 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 Q6ZUG5 572 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 SMCR8Q8TEV9 937 aaPredicted RBP16.91■□□□□ 0.3
USP11-212ENST00000497179 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
USP11-212ENST00000497179 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
USP11-212ENST00000497179 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 R3HDMLQ9H3Y0 253 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
USP11-212ENST00000497179 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
USP11-212ENST00000497179 FLOT1O75955 427 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 DDAH1O94760 285 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 TBC1D8O95759 1140 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 HSPA1AP0DMV8 641 aaKnown RBP16.9■□□□□ 0.3
USP11-212ENST00000497179 HSPA1BP0DMV9 641 aaKnown RBP16.9■□□□□ 0.3
USP11-212ENST00000497179 DSG3P32926 999 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
USP11-212ENST00000497179 TROAPQ12815 778 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 COG2Q14746 738 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
USP11-212ENST00000497179 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 CATIPQ7Z7H3 387 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 FBXO28Q9NVF7 368 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 PPP1R9AQ9ULJ8 1098 aa16.9■□□□□ 0.3
USP11-212ENST00000497179 TMEM232C9JQI7 657 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 BCRP11274 1271 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 STAT2P52630 851 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 FGD1P98174 961 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 GRM4Q14833 912 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 ASPRV1Q53RT3 343 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
USP11-212ENST00000497179 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 FAM160B2Q86V87 743 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 KIF2CQ99661 725 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 HOXC10Q9NYD6 342 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
USP11-212ENST00000497179 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.29
USP11-212ENST00000497179 FRMPD2Q68DX3 1309 aaPredicted RBP16.89■□□□□ 0.29
USP11-212ENST00000497179 FOXN1O15353 648 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
USP11-212ENST00000497179 APOA5Q6Q788 366 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 POTEEQ6S8J3 1075 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 PRPF38AQ8NAV1 312 aaKnown RBP16.88■□□□□ 0.29
USP11-212ENST00000497179 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 BRF1Q92994 677 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 ATG4CQ96DT6 458 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
USP11-212ENST00000497179 PDRG1Q9NUG6 133 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 CPA4Q9UI42 421 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 TSKSQ9UJT2 592 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
USP11-212ENST00000497179 GPR25O00155 361 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 GOLGA8HP0CJ92 632 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 CALM1P0DP23 149 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 CALM2P0DP24 149 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 CALM3P0DP25 149 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
USP11-212ENST00000497179 RCAN1P53805 252 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 EVCP57679 992 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 TOB2Q14106 344 aaPredicted RBP16.87■□□□□ 0.29
USP11-212ENST00000497179 FAM110CQ1W6H9 321 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 TTBK2Q6IQ55 1244 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 MB21D1Q8N884 522 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms