RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 NKX2-3Q8TAU0 364 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 SMCR8Q8TEV9 937 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 NUP133Q8WUM0 1156 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 CHMP4CQ96CF2 233 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 IL17RAQ96F46 866 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 PARK7Q99497 189 aaKnown RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 RPAP3Q9H6T3 665 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 ZCCHC17Q9NP64 241 aaKnown RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 SLC45A1Q9Y2W3 748 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 KLF18A0A0U1RQI7 1052 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 ZBTB43O43298 467 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 DHX16O60231 1041 aaKnown RBP8.87□□□□□ -0.99
VEGFA-214ENST00000493786 FLOT1O75955 427 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 PARP1P09874 1014 aaKnown RBP8.87□□□□□ -0.99
VEGFA-214ENST00000493786 PDHBP11177 359 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 TM4SF4P48230 202 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 STAT2P52630 851 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 DGKZQ13574 1117 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 TAF1CQ15572 869 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-214ENST00000493786 ASPRV1Q53RT3 343 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 TREML2Q5T2D2 321 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 PPP4R3CPQ6ZMV5 832 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 FAM160B2Q86V87 743 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 MICU3Q86XE3 530 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 ZNF654Q8IZM8 581 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-214ENST00000493786 CHURC1Q8WUH1 139 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 GPHNQ9NQX3 736 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-214ENST00000493786 FEM1BQ9UK73 627 aa8.87□□□□□ -0.99
VEGFA-214ENST00000493786 FRMPD2Q68DX3 1309 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 CCDC196A0A1B0GTZ2 297 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 GOLGA8AA7E2F4 631 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 TMEM232C9JQI7 657 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 IGF2BP3O00425 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 HOXA7P31268 230 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 GNAQP50148 359 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 METAP2P50579 478 aaKnown RBP eCLIP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 RCAN1P53805 252 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 AK2P54819 239 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 APOBRQ0VD83 1088 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 MOGSQ13724 837 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 GPAT2Q6NUI2 795 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 APOA5Q6Q788 366 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 CATSPERGQ6ZRH7 1159 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 KCTD1Q719H9 257 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 FBXL16Q8N461 479 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 ZIC5Q96T25 663 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 MAP3K14Q99558 947 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 NUP88Q99567 741 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 SLF1Q9BQI6 1058 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 ASCC2Q9H1I8 757 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 ALDH8A1Q9H2A2 487 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 RBM28Q9NW13 759 aaKnown RBP8.86□□□□□ -0.99
VEGFA-214ENST00000493786 HOXC10Q9NYD6 342 aa8.86□□□□□ -0.99
VEGFA-214ENST00000493786 MYPNQ86TC9 1320 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 PHIPQ8WWQ0 1821 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 CPLX1O14810 134 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 CA12O43570 354 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 ZBED4O75132 1171 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 GOLGA8HP0CJ92 632 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 SNHG28P0DPA3 235 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 FDX1P10109 184 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 MCM2P49736 904 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 ZNF543Q08ER8 600 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-214ENST00000493786 TOB2Q14106 344 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-214ENST00000493786 COG2Q14746 738 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 GRM4Q14833 912 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 PPP2R5BQ15173 497 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 RTN1Q16799 776 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 KIAA1755Q5JYT7 1200 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 CPLX2Q6PUV4 134 aaKnown RBP8.85□□□□□ -0.99
VEGFA-214ENST00000493786 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
VEGFA-214ENST00000493786 CCDC144CPQ8IYA2 1237 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 MB21D1Q8N884 522 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 PRPF38AQ8NAV1 312 aaKnown RBP8.85□□□□□ -0.99
VEGFA-214ENST00000493786 FANCBQ8NB91 859 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 KIFC2Q96AC6 838 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 PTPN18Q99952 460 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 LZTS2Q9BRK4 669 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 MYL10Q9BUA6 226 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 AGXT2Q9BYV1 514 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 PPP1R9AQ9ULJ8 1098 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 MYH4Q9Y623 1939 aa8.85□□□□□ -0.99
VEGFA-214ENST00000493786 LOC285556D6RIA3 1793 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 KLRF2D3W0D1 207 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 PLA2G6O60733 806 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 TRPA1O75762 1119 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 CYP2C8P10632 490 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 RXRAP19793 462 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 KCNA4P22459 653 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 DSG3P32926 999 aa8.84□□□□□ -0.99
VEGFA-214ENST00000493786 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-214ENST00000493786 HERVK_113P62684 666 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms