RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
TM2D1-208ENST00000488206 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
TM2D1-208ENST00000488206 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
TM2D1-208ENST00000488206 PNMA3Q9UL41 463 aa18.31■□□□□ 0.52
TM2D1-208ENST00000488206 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
TM2D1-208ENST00000488206 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 TM4SF4P48230 202 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
TM2D1-208ENST00000488206 TOB2Q14106 344 aaPredicted RBP18.3■□□□□ 0.52
TM2D1-208ENST00000488206 ASPRV1Q53RT3 343 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 IFNL1Q8IU54 200 aa18.3■□□□□ 0.52
TM2D1-208ENST00000488206 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 PDHXO00330 501 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 ZBTB43O43298 467 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 ST18O60284 1047 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 OSBPP22059 807 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 IRX3P78415 501 aaPredicted RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 APOBRQ0VD83 1088 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 TROAPQ12815 778 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 GRM4Q14833 912 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 GPATCH4Q5T3I0 446 aaKnown RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 CTCFLQ8NI51 663 aaPredicted RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 PARK7Q99497 189 aaKnown RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 MAP3K14Q99558 947 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 NUP88Q99567 741 aaPredicted RBP18.29■□□□□ 0.52
TM2D1-208ENST00000488206 PTPN18Q99952 460 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 NID2Q14112 1375 aa18.29■□□□□ 0.52
TM2D1-208ENST00000488206 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 KIF5BP33176 963 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 AK2P54819 239 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 EVCP57679 992 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 MYL10Q9BUA6 226 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 BRPF3Q9ULD4 1205 aa18.28■□□□□ 0.52
TM2D1-208ENST00000488206 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
TM2D1-208ENST00000488206 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.52
TM2D1-208ENST00000488206 MYPNQ86TC9 1320 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 FLOT1O75955 427 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 STAT2P52630 851 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 CATSPERGQ6ZRH7 1159 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 KCTD1Q719H9 257 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
TM2D1-208ENST00000488206 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 PARP14Q460N5 1801 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 TMEM232C9JQI7 657 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 PLA2G6O60733 806 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 METAP2P50579 478 aaKnown RBP eCLIP18.26■□□□□ 0.51
TM2D1-208ENST00000488206 IKQ13123 557 aaPredicted RBP18.26■□□□□ 0.51
TM2D1-208ENST00000488206 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
TM2D1-208ENST00000488206 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
TM2D1-208ENST00000488206 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
TM2D1-208ENST00000488206 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
TM2D1-208ENST00000488206 RXRAP19793 462 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 PPP2R5BQ15173 497 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 TAF1CQ15572 869 aaPredicted RBP18.25■□□□□ 0.51
TM2D1-208ENST00000488206 RTN1Q16799 776 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 RAB11FIP4Q86YS3 637 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 DNAJC5GQ8N7S2 189 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 SMCR8Q8TEV9 937 aaPredicted RBP18.25■□□□□ 0.51
TM2D1-208ENST00000488206 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
TM2D1-208ENST00000488206 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
TM2D1-208ENST00000488206 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
TM2D1-208ENST00000488206 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 PDIA3P30101 505 aaKnown RBP18.24■□□□□ 0.51
TM2D1-208ENST00000488206 MCM2P49736 904 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 GNAQP50148 359 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 HERVK_113P62684 666 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
TM2D1-208ENST00000488206 COG2Q14746 738 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
TM2D1-208ENST00000488206 CCDC144CPQ8IYA2 1237 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 FBXO28Q9NVF7 368 aa18.24■□□□□ 0.51
TM2D1-208ENST00000488206 RLFQ13129 1914 aa18.23■□□□□ 0.51
TM2D1-208ENST00000488206 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 334.4 ms