RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PDHBP11177 359 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 SLC1A4P43007 532 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 COG2Q14746 738 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 TAF1CQ15572 869 aaPredicted RBP22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 FAM83BQ5T0W9 1011 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 LRRC2Q9BYS8 371 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 SENP2Q9HC62 589 aa22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 GPHNQ9NQX3 736 aaPredicted RBP22.69■■□□□ 1.22
PCOLCE-208ENST00000487172 MYPNQ86TC9 1320 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 PLA2G6O60733 806 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 TRPA1O75762 1119 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 IRX3P78415 501 aaPredicted RBP22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 TCEANC2Q96MN5 208 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 MAP3K14Q99558 947 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 P2RX7Q99572 595 aaKnown RBP22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 HOXC10Q9NYD6 342 aa22.68■■□□□ 1.22
PCOLCE-208ENST00000487172 CYP2C8P10632 490 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 TROAPQ12815 778 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 LBX2Q6XYB7 198 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 Q6ZUG5 572 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 CATIPQ7Z7H3 387 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 NUP88Q99567 741 aaPredicted RBP22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 TANGO6Q9C0B7 1094 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 FEM1BQ9UK73 627 aa22.67■■□□□ 1.22
PCOLCE-208ENST00000487172 ADGRA2Q96PE1 1338 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 CCDC69A6NI79 296 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 TLR2O60603 784 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 DSG3P32926 999 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 GCLCP48506 637 aaPredicted RBP22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 ZNF543Q08ER8 600 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 CRHR2Q13324 411 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 GTF3C2Q8WUA4 911 aaPredicted RBP22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 TBC1D32Q96NH3 1257 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 KIF2CQ99661 725 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 UPF3BQ9BZI7 483 aaKnown RBP22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 RLFQ13129 1914 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 PARP14Q460N5 1801 aa22.66■■□□□ 1.22
PCOLCE-208ENST00000487172 FLOT1O75955 427 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 DDAH1O94760 285 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 HERVK_113P62684 666 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 FGD1P98174 961 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 ASPRV1Q53RT3 343 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 BTNL9Q6UXG8 535 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 NFXL1Q6ZNB6 911 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 FAM160B2Q86V87 743 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 ZNF654Q8IZM8 581 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 CHURC1Q8WUH1 139 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 ADAMTS5Q9UNA0 930 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 MTMR7Q9Y216 660 aa22.65■■□□□ 1.22
PCOLCE-208ENST00000487172 TMEM232C9JQI7 657 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 TBC1D8O95759 1140 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 STAT2P52630 851 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 C17orf99Q6UX52 265 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 KCTD1Q719H9 257 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 PRPF38AQ8NAV1 312 aaKnown RBP22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 IL27Q8NEV9 243 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 SMCR8Q8TEV9 937 aaPredicted RBP22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 SLF1Q9BQI6 1058 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 PDRG1Q9NUG6 133 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 FBXO28Q9NVF7 368 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 PPP1R9AQ9ULJ8 1098 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 SLC12A7Q9Y666 1083 aa22.64■■□□□ 1.21
PCOLCE-208ENST00000487172 PALM3A6NDB9 673 aaPredicted RBP22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 SPDYE16A6NNV3 312 aaPredicted RBP22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 PARP1P09874 1014 aaKnown RBP22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 CALM1P0DP23 149 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 CALM2P0DP24 149 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 CALM3P0DP25 149 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 RCAN1P53805 252 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 EVCP57679 992 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 GRM4Q14833 912 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 CCDC96Q2M329 555 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 RASGRP2Q7LDG7 609 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 R3HDMLQ9H3Y0 253 aa22.63■■□□□ 1.21
PCOLCE-208ENST00000487172 FDX1P10109 184 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 BCRP11274 1271 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 TOB2Q14106 344 aaPredicted RBP22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 APOA5Q6Q788 366 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 SYNE3Q6ZMZ3 975 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 BRF1Q92994 677 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 BRPF3Q9ULD4 1205 aa22.62■■□□□ 1.21
PCOLCE-208ENST00000487172 FRMPD2Q68DX3 1309 aaPredicted RBP22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 HSPA1AP0DMV8 641 aaKnown RBP22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 HSPA1BP0DMV9 641 aaKnown RBP22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 NEK4P51957 841 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 TTBK2Q6IQ55 1244 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 POTEEQ6S8J3 1075 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 MB21D1Q8N884 522 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 CHMP4CQ96CF2 233 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 GPCPD1Q9NPB8 672 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 RBPJLQ9UBG7 517 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 MORF4L1Q9UBU8 362 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 MAD2L2Q9UI95 211 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 RABGAP1Q9Y3P9 1069 aa22.61■■□□□ 1.21
PCOLCE-208ENST00000487172 NUP133Q8WUM0 1156 aa22.6■■□□□ 1.21
PCOLCE-208ENST00000487172 ATG4CQ96DT6 458 aa22.6■■□□□ 1.21
PCOLCE-208ENST00000487172 ISY1Q9ULR0 285 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms