RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 AKR1A1P14550 325 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 TAL1P17542 331 aaPredicted RBP22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 FAAP100Q0VG06 881 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 KCTD2Q14681 263 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 TMEM179Q6ZVK1 233 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 NUP133Q8WUM0 1156 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 LENG1Q96BZ8 264 aaPredicted RBP22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 SH2D4AQ9H788 454 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 CNPY2Q9Y2B0 182 aa22.99■■□□□ 1.27
NCKIPSD-209ENST00000470006 ATP8B2P98198 1209 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 GABPAQ06546 454 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 TMEM132BQ14DG7 1078 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 CCDC174Q6PII3 467 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 SSH3Q8TE77 659 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 ATXN2LQ8WWM7 1075 aaKnown RBP22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.98■■□□□ 1.274e-6■■□□□ 11.8
NCKIPSD-209ENST00000470006 RIOK1Q9BRS2 568 aaKnown RBP22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 PRDM12Q9H4Q4 367 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 THEGQ9P2T0 379 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 PLXNA1Q9UIW2 1896 aa22.98■■□□□ 1.27
NCKIPSD-209ENST00000470006 RAD21O60216 631 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 TIMP1P01033 207 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 ACLYP53396 1101 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 EVX2Q03828 476 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 CCDC85BQ15834 202 aaPredicted RBP22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 VTI1AQ96AJ9 217 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 EAF2Q96CJ1 260 aaPredicted RBP22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 TOX2Q96NM4 488 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 C1orf115Q9H7X2 142 aa22.97■■□□□ 1.27
NCKIPSD-209ENST00000470006 MYH8P13535 1937 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 GRXCR1A8MXD5 290 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 IGFBP4P22692 258 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 PBX2P40425 430 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 ICA1Q05084 483 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 PPIGQ13427 754 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■□□ 19
NCKIPSD-209ENST00000470006 TMED8Q6PL24 325 aaPredicted RBP22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 ANKRD33Q7Z3H0 272 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 CLEC10AQ8IUN9 316 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 ADAMTS19Q8TE59 1207 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 ASB2Q96Q27 587 aa22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 TSEN34Q9BSV6 310 aaKnown RBP22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 COL11A1P12107 1806 aaPredicted RBP22.96■■□□□ 1.27
NCKIPSD-209ENST00000470006 APBB1O00213 710 aa22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 WDR46O15213 610 aaKnown RBP22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 TMEM57Q8N5G2 664 aa22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 PBX4Q9BYU1 374 aa22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 VCPKMTQ9H867 229 aa22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 DIS3Q9Y2L1 958 aaKnown RBP22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 TMX2Q9Y320 296 aa22.95■■□□□ 1.26
NCKIPSD-209ENST00000470006 ZNF865P0CJ78 1059 aaPredicted RBP22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 CYP2D6P10635 497 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 STAT3P40763 770 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 MRPS5P82675 430 aaKnown RBP22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 KCNA10Q16322 511 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 ZNF792Q3KQV3 632 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 SLC9C2Q5TAH2 1124 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 MFSD5Q6N075 450 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 RIOX2Q8IUF8 465 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 SDR42E1Q8WUS8 393 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 DYNLL2Q96FJ2 89 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 UHRF1Q96T88 793 aaPredicted RBP22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 SWAP70Q9UH65 585 aa22.94■■□□□ 1.26
NCKIPSD-209ENST00000470006 SYNRGQ9UMZ2 1314 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 ADAMTS4O75173 837 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 AKR1B1P15121 316 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 AKNAD1Q5T1N1 836 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 FAM122AQ96E09 287 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 MSRAQ9UJ68 235 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 ZHX1Q9UKY1 873 aaPredicted RBP22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 FAM184BQ9ULE4 1060 aa22.93■■□□□ 1.26
NCKIPSD-209ENST00000470006 NCOR1O75376 2440 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 MROH7Q68CQ1 1323 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 MOXD2PA6NHM9 499 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 TTF1Q15361 905 aaPredicted RBP22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 TMEM240Q5SV17 173 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 AACSQ86V21 672 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 TMEM199Q8N511 208 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 GLT1D1Q96MS3 346 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 FBXO28Q9NVF7 368 aa22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 NOP58Q9Y2X3 529 aaKnown RBP22.92■■□□□ 1.26
NCKIPSD-209ENST00000470006 ACRP10323 421 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 CSF2RAP15509 400 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 PDE6AP16499 860 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 SIAH1Q8IUQ4 282 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 PPP1R12CQ9BZL4 782 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 DCP1AQ9NPI6 582 aaPredicted RBP22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 TBX21Q9UL17 535 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 PARP14Q460N5 1801 aa22.91■■□□□ 1.26
NCKIPSD-209ENST00000470006 ZNF532Q9HCE3 1301 aa22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 C6orf222P0C671 652 aaPredicted RBP22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 COPB2P35606 906 aa22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 C16orf59Q7L2K0 433 aa22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 DDX11Q96FC9 970 aa22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 SPC25Q9HBM1 224 aa22.9■■□□□ 1.26
NCKIPSD-209ENST00000470006 ROBO3Q96MS0 1386 aa22.89■■□□□ 1.26
NCKIPSD-209ENST00000470006 VWA5AO00534 786 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 PLA2G5P39877 138 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 PSRC1Q6PGN9 363 aaPredicted RBP22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 ZNF365Q70YC5 407 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms