RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 CLEC10AQ8IUN9 316 aa16.08■□□□□ 0.16
MRPL55-224ENST00000464148 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
MRPL55-224ENST00000464148 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
MRPL55-224ENST00000464148 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
MRPL55-224ENST00000464148 TINF2Q9BSI4 451 aa16.08■□□□□ 0.16
MRPL55-224ENST00000464148 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
MRPL55-224ENST00000464148 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
MRPL55-224ENST00000464148 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-224ENST00000464148 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-224ENST00000464148 DCDC2CA8MYV0 355 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 WDR46O15213 610 aaKnown RBP16.07■□□□□ 0.16
MRPL55-224ENST00000464148 PDE6AP16499 860 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 DNAJB2P25686 324 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 TJAP1Q5JTD0 557 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 ITPRIPQ8IWB1 547 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 VCPKMTQ9H867 229 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 DCP1AQ9NPI6 582 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-224ENST00000464148 ZNF532Q9HCE3 1301 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 MYH8P13535 1937 aa16.07■□□□□ 0.16
MRPL55-224ENST00000464148 AKR1A1P14550 325 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 AKR1B1P15121 316 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 TAL1P17542 331 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-224ENST00000464148 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 LCORLQ8N3X6 602 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 EXOC6BQ9Y2D4 811 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
MRPL55-224ENST00000464148 RAD21O60216 631 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 ZNF792Q3KQV3 632 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-224ENST00000464148 DNAJC2Q99543 621 aaKnown RBP16.05■□□□□ 0.16
MRPL55-224ENST00000464148 ZNF576Q9H609 170 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 DIS3Q9Y2L1 958 aaKnown RBP16.05■□□□□ 0.16
MRPL55-224ENST00000464148 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-224ENST00000464148 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
MRPL55-224ENST00000464148 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 GOLIM4O00461 696 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ZNF865P0CJ78 1059 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-224ENST00000464148 STAT3P40763 770 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ACLYP53396 1101 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 AMOTL1Q8IY63 956 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 CCDC17Q96LX7 622 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 TSEN34Q9BSV6 310 aaKnown RBP16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ARMT1Q9H993 441 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 FBXO28Q9NVF7 368 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
MRPL55-224ENST00000464148 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 VWA5AO00534 786 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 TIMP1P01033 207 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
MRPL55-224ENST00000464148 COPB2P35606 906 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 CEP85Q6P2H3 762 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 CCDC129Q6ZRS4 1044 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 GOPCQ9HD26 462 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 TTC28Q96AY4 2481 aa16.03■□□□□ 0.16
MRPL55-224ENST00000464148 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 MUC3AQ02505 3323 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 TCRBV5S4A2TA0A5A2 114 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 PRKAB2O43741 272 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 COL9A1P20849 921 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 CDK8P49336 464 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 KCNA10Q16322 511 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 CCDC174Q6PII3 467 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 GAS2L1Q99501 681 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-224ENST00000464148 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.02■□□□□ 0.161e-7■■■■□ 24.9
MRPL55-224ENST00000464148 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 PPP1R9AQ9ULJ8 1098 aa16.02■□□□□ 0.16
MRPL55-224ENST00000464148 MROH7Q68CQ1 1323 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 CYP2D7A0A087X1C5 515 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 MBD4O95243 580 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 DDX11Q96FC9 970 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 KANSL2Q9H9L4 492 aa16.01■□□□□ 0.15
MRPL55-224ENST00000464148 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-224ENST00000464148 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-224ENST00000464148 APBB1O00213 710 aa16■□□□□ 0.15
MRPL55-224ENST00000464148 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
MRPL55-224ENST00000464148 RLBP1P12271 317 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms