RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 USP17L13C9JLJ4 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L11C9JVI0 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L18D6R9N7 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L22D6RA61 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L17D6RBQ6 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L19D6RCP7 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L20D6RJB6 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 NMT2O60551 498 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 CYP21A2P08686 494 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 USP17L24Q0WX57 530 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 CATSPERGQ6ZRH7 1159 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 ANKRD13CQ8N6S4 541 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 RBM8AQ9Y5S9 174 aaKnown RBP20.93■□□□□ 0.94
SF1-212ENST00000463343 GREB1LQ9C091 1923 aaPredicted RBP20.93■□□□□ 0.94
SF1-212ENST00000463343 NEDD4P46934 1319 aa20.93■□□□□ 0.94
SF1-212ENST00000463343 SZT2Q5T011 3432 aa20.92■□□□□ 0.94
SF1-212ENST00000463343 TFRCP02786 760 aaKnown RBP20.92■□□□□ 0.94
SF1-212ENST00000463343 ELNP15502 786 aa20.92■□□□□ 0.94
SF1-212ENST00000463343 SPICE1Q8N0Z3 855 aa20.92■□□□□ 0.94
SF1-212ENST00000463343 RPAP3Q9H6T3 665 aaPredicted RBP20.92■□□□□ 0.94
SF1-212ENST00000463343 TTLL1O95922 423 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 NOVP48745 357 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 IRX3P78415 501 aaPredicted RBP20.91■□□□□ 0.94
SF1-212ENST00000463343 LPAR1Q92633 364 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 ANO2Q9NQ90 1003 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 TCP11L1Q9NUJ3 509 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 TAF6LQ9Y6J9 622 aa20.91■□□□□ 0.94
SF1-212ENST00000463343 F5H6K3 240 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 KLRC3Q07444 240 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 POTEEQ6S8J3 1075 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 ANKLE1Q8NAG6 615 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 ESR2Q92731 530 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 DEFB118Q96PH6 123 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 GOPCQ9HD26 462 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
SF1-212ENST00000463343 B4E1Z4 1266 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 KDM4AO75164 1064 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 HERVK_113P62684 666 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 NECTIN1Q15223 517 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 ZSWIM5Q9P217 1185 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 MORF4L1Q9UBU8 362 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 STX8Q9UNK0 236 aa20.89■□□□□ 0.93
SF1-212ENST00000463343 WDR46O15213 610 aaKnown RBP20.88■□□□□ 0.93
SF1-212ENST00000463343 RAD21O60216 631 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 EVI5O60447 810 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 NDUFB10O96000 172 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 PPP4R3BQ5MIZ7 849 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 LRRC47Q8N1G4 583 aaKnown RBP20.88■□□□□ 0.93
SF1-212ENST00000463343 KRT23Q9C075 422 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 RBPJLQ9UBG7 517 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 SYNPO2Q9UMS6 1093 aa20.88■□□□□ 0.93
SF1-212ENST00000463343 E7EWF7 191 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 PEX10O60683 326 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 HMGCRP04035 888 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 NT5C2P49902 561 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 COG2Q14746 738 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 RCSD1Q6JBY9 416 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 STOX1Q6ZVD7 989 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 NECAB2Q7Z6G3 386 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 NUP88Q99567 741 aaPredicted RBP20.87■□□□□ 0.93
SF1-212ENST00000463343 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 TANGO6Q9C0B7 1094 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 CNNM2Q9H8M5 875 aa20.87■□□□□ 0.93
SF1-212ENST00000463343 RPTORQ8N122 1335 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 LAMA4Q16363 1823 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 SLC27A2O14975 620 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 FAM83BQ5T0W9 1011 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 CREB3L3Q68CJ9 461 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 GMCL1P1Q8NEA9 526 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 TTC14Q96N46 770 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.86■□□□□ 0.937e-7■■■■■ 40.1
SF1-212ENST00000463343 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
SF1-212ENST00000463343 SPDYE16A6NNV3 312 aaPredicted RBP20.85■□□□□ 0.93
SF1-212ENST00000463343 SLFN13Q68D06 897 aa20.85■□□□□ 0.93
SF1-212ENST00000463343 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
SF1-212ENST00000463343 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
SF1-212ENST00000463343 PAWRQ96IZ0 340 aaKnown RBP20.85■□□□□ 0.93
SF1-212ENST00000463343 TMEM47Q9BQJ4 181 aa20.85■□□□□ 0.93
SF1-212ENST00000463343 CNMDO75829 334 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 TOP1P11387 765 aaKnown RBP20.84■□□□□ 0.93
SF1-212ENST00000463343 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
SF1-212ENST00000463343 DSG3P32926 999 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 TRDNQ13061 729 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 Q3C1V9 767 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 ANKS1AQ92625 1134 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 HMX1Q9NP08 348 aaPredicted RBP20.84■□□□□ 0.93
SF1-212ENST00000463343 FBXO28Q9NVF7 368 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
SF1-212ENST00000463343 FLOT1O75955 427 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 BMP8BP34820 402 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 IQCA1Q86XH1 822 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 GPRC5AQ8NFJ5 357 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 GTF3C2Q8WUA4 911 aaPredicted RBP20.83■□□□□ 0.93
SF1-212ENST00000463343 CHMP4CQ96CF2 233 aa20.83■□□□□ 0.93
SF1-212ENST00000463343 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.93
SF1-212ENST00000463343 PAGR1Q9BTK6 254 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms