RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 RNF180Q86T96 592 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 SLC44A5Q8NCS7 719 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 TIFAQ96CG3 184 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 NOP58Q9Y2X3 529 aaKnown RBP20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 FLOT1O75955 427 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 POLR3DP05423 398 aaPredicted RBP20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 PBX2P40425 430 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 ZNF792Q3KQV3 632 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 SPICE1Q8N0Z3 855 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 CLUAP1Q96AJ1 413 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 TOX2Q96NM4 488 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 TINF2Q9BSI4 451 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 ADAMTS5Q9UNA0 930 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 MYO9BQ13459 2157 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 MYH8P13535 1937 aa20.9■□□□□ 0.94
UBE2D4-209ENST00000454428 CYP2D6P10635 497 aa20.89■□□□□ 0.93
UBE2D4-209ENST00000454428 RASIP1Q5U651 963 aa20.89■□□□□ 0.93
UBE2D4-209ENST00000454428 TBX21Q9UL17 535 aa20.89■□□□□ 0.93
UBE2D4-209ENST00000454428 GRXCR1A8MXD5 290 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 MAP3K12Q12852 859 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 CCSAPQ6IQ19 270 aaPredicted RBP20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 TMEM179Q6ZVK1 233 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 TMEM57Q8N5G2 664 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 MMP19Q99542 508 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 PBX4Q9BYU1 374 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 C1orf115Q9H7X2 142 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 MCM9Q9NXL9 1143 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 TMX2Q9Y320 296 aa20.88■□□□□ 0.93
UBE2D4-209ENST00000454428 SLC25A27O95847 323 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 TIMP1P01033 207 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 ACLYP53396 1101 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 ADGRE1Q14246 886 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 TMED8Q6PL24 325 aaPredicted RBP20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 KLHDC9Q8NEP7 349 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 ATXN2LQ8WWM7 1075 aaKnown RBP20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 DIS3Q9Y2L1 958 aaKnown RBP20.87■□□□□ 0.93
UBE2D4-209ENST00000454428 SYNRGQ9UMZ2 1314 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 MAGEB6P1A0A0J9YX57 407 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 SMIM22K7EJ46 135 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 AKR1A1P14550 325 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 AKR1B1P15121 316 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 TMEM240Q5SV17 173 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 RIOX2Q8IUF8 465 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 SDR42E1Q8WUS8 393 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 PPM1EQ8WY54 764 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 FRAT1Q92837 279 aaPredicted RBP20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 DYNLL2Q96FJ2 89 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 ASB2Q96Q27 587 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 TSEN34Q9BSV6 310 aaKnown RBP20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 PRDM12Q9H4Q4 367 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 DCP1AQ9NPI6 582 aaPredicted RBP20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 FBXO28Q9NVF7 368 aa20.86■□□□□ 0.93
UBE2D4-209ENST00000454428 MYADML2A6NDP7 307 aa20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 DCDC2CA8MYV0 355 aa20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 IRX5P78411 483 aaPredicted RBP20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 AKNAD1Q5T1N1 836 aa20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 SAMD1Q6SPF0 538 aaPredicted RBP20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 REPS2Q8NFH8 660 aa20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 STARD7Q9NQZ5 370 aa20.85■□□□□ 0.93
UBE2D4-209ENST00000454428 GBF1Q92538 1859 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 WDR46O15213 610 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 PDE6AP16499 860 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 ICA1Q05084 483 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 MFSD5Q6N075 450 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 LCORLQ8N3X6 602 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 ADAMTS19Q8TE59 1207 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 CRNKL1Q9BZJ0 848 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 THEGQ9P2T0 379 aa20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-209ENST00000454428 TRANK1O15050 2925 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 SNAI1O95863 264 aaPredicted RBP20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 CDK7P50613 346 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 KCNA10Q16322 511 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 GAS2L1Q99501 681 aaPredicted RBP20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 ARHGEF10LQ9HCE6 1279 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 SWAP70Q9UH65 585 aa20.83■□□□□ 0.93
UBE2D4-209ENST00000454428 VWA5AO00534 786 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 ADCY6O43306 1168 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 CSF2RAP15509 400 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 KCTD2Q14681 263 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 SLC9C2Q5TAH2 1124 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 NUP133Q8WUM0 1156 aa20.82■□□□□ 0.92
UBE2D4-209ENST00000454428 ZNF532Q9HCE3 1301 aa20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 PLA2G5P39877 138 aa20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 STAT3P40763 770 aa20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 PPIGQ13427 754 aaKnown RBP eCLIP20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 PPP1R9AQ9ULJ8 1098 aa20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 CNPY2Q9Y2B0 182 aa20.81■□□□□ 0.92
UBE2D4-209ENST00000454428 MCM3APO60318 1980 aa20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 ACRP10323 421 aa20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 MRPS5P82675 430 aaKnown RBP20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 CCDC85BQ15834 202 aaPredicted RBP20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 CCDC129Q6ZRS4 1044 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms