RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 UBE3DQ7Z6J8 389 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 HID1Q8IV36 788 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 MYO1HQ8N1T3 1032 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 KLHL23Q8NBE8 558 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 GSTCDQ8NEC7 633 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 SMARCC1Q92922 1105 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 SCLYQ96I15 445 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 PPP1R9AQ9ULJ8 1098 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZNF451Q9Y4E5 1061 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 BLACEA4D250 179 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 SHOXO15266 292 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 TMPRSS2O15393 492 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 OPA1O60313 960 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 ID3Q02535 119 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 SETDB1Q15047 1291 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 SF1Q15637 639 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 RNF219Q5W0B1 726 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 GDF2Q9UK05 429 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 JMJD7P0C870 316 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 ATF3P18847 181 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 ALAS2P22557 587 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 TMPRSS15P98073 1019 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 DHCR24Q15392 516 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 ADCY4Q8NFM4 1077 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 CYB5D2Q8WUJ1 264 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 BTN2A2Q8WVV5 523 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 MRGPRX3Q96LB0 322 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 YIPF4Q9BSR8 244 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 MKRN2Q9H000 416 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
CDC42BPA-207ENST00000441725 FAM181BA6NEQ2 426 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 SPDYE3A6NKU9 549 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 DLX3O60479 287 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 EIF3JO75822 258 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLURP2P0DP57 97 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CD247P20963 164 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLBPQ14493 270 aaKnown RBP eCLIP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 FOXD4L6Q3SYB3 417 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 PRAMEF13Q5VWM6 474 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 MSL1Q68DK7 614 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 FOXD4L3Q6VB84 417 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 WFDC8Q8IUA0 241 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CHPFQ8IZ52 775 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 COG1Q8WTW3 980 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 RTFDC1Q9BY42 306 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 GBP3Q9H0R5 595 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CDH19Q9H159 772 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 DISC1Q9NRI5 854 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 KCNK4Q9NYG8 393 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CRIM1Q9NZV1 1036 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 LILRB5O75023 590 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CAND2O75155 1236 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 PPM1BO75688 479 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 NPTXRO95502 500 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 ASLP04424 464 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 ID4P47928 161 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 GABREP78334 506 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 HP1BP3Q5SSJ5 553 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 RNF214Q8ND24 703 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 TTC8Q8TAM2 541 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZNF507Q8TCN5 953 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 HOOK2Q96ED9 719 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 CHST12Q9NRB3 414 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 WHRNQ9P202 907 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 TRHDEQ9UKU6 1024 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 AKT3Q9Y243 479 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 EMC9Q9Y3B6 208 aa5.35□□□□□ -1.55
CDC42BPA-207ENST00000441725 NOP56O00567 594 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 NEMP1O14524 444 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 GABRDO14764 452 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 PRPF3O43395 683 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 BRINP1O60477 761 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 NEFMP07197 916 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 TTLL4Q14679 1199 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 NTRK3Q16288 839 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 SKOR2Q2VWA4 1001 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 SPATS2Q86XZ4 545 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 CNTD1Q8N815 330 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 BRF1Q92994 677 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLC39A13Q96H72 371 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 NAP1L5Q96NT1 182 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 AASDHPPTQ9NRN7 309 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 MBIPQ9NS73 344 aa5.34□□□□□ -1.55
CDC42BPA-207ENST00000441725 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.56
CDC42BPA-207ENST00000441725 M0R082 166 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 EFCAB14O75071 495 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 IGFALSP35858 605 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 MAP2K3P46734 347 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 SRSF11Q05519 484 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms