RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 BTBD19C9JJ37 291 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 KIF5BP33176 963 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 NEK4P51957 841 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 PPP2R5BQ15173 497 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 ZNF654Q8IZM8 581 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 CHURC1Q8WUH1 139 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 LRRC2Q9BYS8 371 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 TANGO6Q9C0B7 1094 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 RPAP3Q9H6T3 665 aaPredicted RBP28.15■■■□□ 2.1
APOE-202ENST00000425718 FEM1BQ9UK73 627 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 PARP14Q460N5 1801 aa28.15■■■□□ 2.1
APOE-202ENST00000425718 ST18O60284 1047 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 PLA2G6O60733 806 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 SNHG28P0DPA3 235 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 PDHBP11177 359 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 GPAT2Q6NUI2 795 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 CATSPERGQ6ZRH7 1159 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 FAM160B2Q86V87 743 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 SPICE1Q8N0Z3 855 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 BEGAINQ9BUH8 593 aa28.14■■■□□ 2.1
APOE-202ENST00000425718 PDHXO00330 501 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 PARP1P09874 1014 aaKnown RBP28.13■■■□□ 2.09
APOE-202ENST00000425718 FDX1P10109 184 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 CPA1P15085 419 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 CCDC96Q2M329 555 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 DNAJC5GQ8N7S2 189 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 CTCFLQ8NI51 663 aaPredicted RBP28.13■■■□□ 2.09
APOE-202ENST00000425718 BRF1Q92994 677 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 TCEANC2Q96MN5 208 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 HOXC10Q9NYD6 342 aa28.13■■■□□ 2.09
APOE-202ENST00000425718 ISY1Q9ULR0 285 aaKnown RBP28.13■■■□□ 2.09
APOE-202ENST00000425718 CA12O43570 354 aa28.12■■■□□ 2.09
APOE-202ENST00000425718 GNAQP50148 359 aa28.12■■■□□ 2.09
APOE-202ENST00000425718 STAT2P52630 851 aa28.12■■■□□ 2.09
APOE-202ENST00000425718 TREML2Q5T2D2 321 aa28.12■■■□□ 2.09
APOE-202ENST00000425718 PTPN18Q99952 460 aa28.12■■■□□ 2.09
APOE-202ENST00000425718 ZBTB43O43298 467 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 ZNF543Q08ER8 600 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 TROAPQ12815 778 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 COG2Q14746 738 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 FAM83BQ5T0W9 1011 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 APOA5Q6Q788 366 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 KIF2CQ99661 725 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 ZFYVE28Q9HCC9 887 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 MTMR7Q9Y216 660 aa28.11■■■□□ 2.09
APOE-202ENST00000425718 KLF18A0A0U1RQI7 1052 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 CCDC196A0A1B0GTZ2 297 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 IGF2BP3O00425 579 aaKnown RBP eCLIP28.1■■■□□ 2.09
APOE-202ENST00000425718 FLOT1O75955 427 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 EVCP57679 992 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 GRM4Q14833 912 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 TAF1CQ15572 869 aaPredicted RBP28.1■■■□□ 2.09
APOE-202ENST00000425718 FAM43AQ8N2R8 423 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 CHMP4CQ96CF2 233 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 ZIC5Q96T25 663 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 LZTS2Q9BRK4 669 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 RBM28Q9NW13 759 aaKnown RBP28.1■■■□□ 2.09
APOE-202ENST00000425718 SAGE1Q9NXZ1 904 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 MYH6P13533 1939 aa28.1■■■□□ 2.09
APOE-202ENST00000425718 GCLCP48506 637 aaPredicted RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 IKQ13123 557 aaPredicted RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 KIAA1755Q5JYT7 1200 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 MB21D1Q8N884 522 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 PRPF38AQ8NAV1 312 aaKnown RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 SMCR8Q8TEV9 937 aaPredicted RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 NUP133Q8WUM0 1156 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 ZNF274Q96GC6 653 aaPredicted RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 SLF1Q9BQI6 1058 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 CFHR5Q9BXR6 569 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 ASCC2Q9H1I8 757 aaPredicted RBP28.09■■■□□ 2.09
APOE-202ENST00000425718 RLFQ13129 1914 aa28.09■■■□□ 2.09
APOE-202ENST00000425718 MCM2P49736 904 aa28.08■■■□□ 2.09
APOE-202ENST00000425718 DGKZQ13574 1117 aa28.08■■■□□ 2.09
APOE-202ENST00000425718 COL9A3Q14050 684 aaPredicted RBP28.08■■■□□ 2.09
APOE-202ENST00000425718 LBX2Q6XYB7 198 aa28.08■■■□□ 2.09
APOE-202ENST00000425718 SENP2Q9HC62 589 aa28.08■■■□□ 2.09
APOE-202ENST00000425718 GPHNQ9NQX3 736 aaPredicted RBP28.08■■■□□ 2.09
APOE-202ENST00000425718 TMEM232C9JQI7 657 aa28.07■■■□□ 2.08
APOE-202ENST00000425718 APOBRQ0VD83 1088 aa28.07■■■□□ 2.08
APOE-202ENST00000425718 TOB2Q14106 344 aaPredicted RBP28.07■■■□□ 2.08
APOE-202ENST00000425718 BTNL9Q6UXG8 535 aa28.07■■■□□ 2.08
APOE-202ENST00000425718 PNMA2Q9UL42 364 aa28.07■■■□□ 2.08
APOE-202ENST00000425718 PPP1R9AQ9ULJ8 1098 aa28.07■■■□□ 2.08
APOE-202ENST00000425718 NAP1L2Q9ULW6 460 aaPredicted RBP28.07■■■□□ 2.08
APOE-202ENST00000425718 CTDP1Q9Y5B0 961 aaPredicted RBP28.07■■■□□ 2.08
APOE-202ENST00000425718 SMARCA1P28370 1054 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 DSG3P32926 999 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 KCTD1Q719H9 257 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 MICU3Q86XE3 530 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 FANCBQ8NB91 859 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 NUP88Q99567 741 aaPredicted RBP28.06■■■□□ 2.08
APOE-202ENST00000425718 NID2Q14112 1375 aa28.06■■■□□ 2.08
APOE-202ENST00000425718 PALM3A6NDB9 673 aaPredicted RBP28.05■■■□□ 2.08
APOE-202ENST00000425718 GOLGA8BA8MQT2 603 aa28.05■■■□□ 2.08
APOE-202ENST00000425718 METAP2P50579 478 aaKnown RBP eCLIP28.05■■■□□ 2.08
APOE-202ENST00000425718 AK2P54819 239 aa28.05■■■□□ 2.08
APOE-202ENST00000425718 HERVK_113P62684 666 aa28.05■■■□□ 2.08
APOE-202ENST00000425718 JMYQ8N9B5 988 aa28.05■■■□□ 2.08
APOE-202ENST00000425718 GOLGA8AA7E2F4 631 aa28.04■■■□□ 2.08
APOE-202ENST00000425718 RTN1Q16799 776 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms