RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 GPRC5AQ8NFJ5 357 aa20.77■□□□□ 0.92
EPCAM-203ENST00000419334 ANKS1AQ92625 1134 aa20.77■□□□□ 0.92
EPCAM-203ENST00000419334 GMCL1Q96IK5 515 aa20.77■□□□□ 0.92
EPCAM-203ENST00000419334 NUP88Q99567 741 aaPredicted RBP20.77■□□□□ 0.92
EPCAM-203ENST00000419334 TNKSO95271 1327 aa20.77■□□□□ 0.91
EPCAM-203ENST00000419334 CNMDO75829 334 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 BMP3P12645 472 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 CTGFP29279 349 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 PSMC4P43686 418 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 FCGRTP55899 365 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 ERVK-9P63128 1117 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 ERVK-24P63145 666 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 MB21D1Q8N884 522 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 UBAC1Q9BSL1 405 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 PAGR1Q9BTK6 254 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 FBXO28Q9NVF7 368 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 PPP1R9AQ9ULJ8 1098 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 ADAMTS5Q9UNA0 930 aa20.76■□□□□ 0.91
EPCAM-203ENST00000419334 DOCK3Q8IZD9 2030 aa20.75■□□□□ 0.91
EPCAM-203ENST00000419334 EPB41L2O43491 1005 aaKnown RBP20.75■□□□□ 0.91
EPCAM-203ENST00000419334 SLC1A4P43007 532 aa20.75■□□□□ 0.91
EPCAM-203ENST00000419334 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
EPCAM-203ENST00000419334 TNS4Q8IZW8 715 aa20.75■□□□□ 0.91
EPCAM-203ENST00000419334 ENAHQ8N8S7 591 aaPredicted RBP20.75■□□□□ 0.91
EPCAM-203ENST00000419334 TRIM47Q96LD4 638 aa20.75■□□□□ 0.91
EPCAM-203ENST00000419334 MCOLN1Q9GZU1 580 aa20.75■□□□□ 0.91
EPCAM-203ENST00000419334 PEX10O60683 326 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 MCCP23508 829 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 ATG4CQ96DT6 458 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 SLF1Q9BQI6 1058 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 BTBD7Q9P203 1132 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 FEM1BQ9UK73 627 aa20.74■□□□□ 0.91
EPCAM-203ENST00000419334 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
EPCAM-203ENST00000419334 SEC23AQ15436 765 aa20.73■□□□□ 0.91
EPCAM-203ENST00000419334 Q3C1V9 767 aa20.73■□□□□ 0.91
EPCAM-203ENST00000419334 FBXO46Q6PJ61 603 aaPredicted RBP20.73■□□□□ 0.91
EPCAM-203ENST00000419334 PRPF38AQ8NAV1 312 aaKnown RBP20.73■□□□□ 0.91
EPCAM-203ENST00000419334 TNPO2O14787 897 aaKnown RBP20.72■□□□□ 0.91
EPCAM-203ENST00000419334 PLA2G6O60733 806 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 ECM2O94769 699 aaPredicted RBP20.72■□□□□ 0.91
EPCAM-203ENST00000419334 HOXD10P28358 340 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 HSPA4P34932 840 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 STAT2P52630 851 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 PRMT2P55345 433 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 CCNA1P78396 465 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 RASGRP2Q7LDG7 609 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 PNMA1Q8ND90 353 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 KAT14Q9H8E8 782 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
EPCAM-203ENST00000419334 TMEM232C9JQI7 657 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 VWA5AO00534 786 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 SNHG28P0DPA3 235 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 PDHBP11177 359 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
EPCAM-203ENST00000419334 MAPK4P31152 587 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 ANTXR2P58335 489 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 SART3Q15020 963 aaKnown RBP20.71■□□□□ 0.91
EPCAM-203ENST00000419334 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
EPCAM-203ENST00000419334 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
EPCAM-203ENST00000419334 KCTD1Q719H9 257 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 FAM160B2Q86V87 743 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 CHURC1Q8WUH1 139 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 KCNB2Q92953 911 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 PORCNQ9H237 461 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 SRRDQ9UH36 339 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 MTMR7Q9Y216 660 aa20.71■□□□□ 0.91
EPCAM-203ENST00000419334 PLXNB2O15031 1838 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 ERICH2A1L162 156 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 IFIT3O14879 490 aaKnown RBP20.7■□□□□ 0.9
EPCAM-203ENST00000419334 MCM5P33992 734 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 KRT32Q14532 448 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 CCDC96Q2M329 555 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 REPS2Q8NFH8 660 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 COA7Q96BR5 231 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 SPATC1LQ9H0A9 340 aa20.7■□□□□ 0.9
EPCAM-203ENST00000419334 ISY1Q9ULR0 285 aaKnown RBP20.7■□□□□ 0.9
EPCAM-203ENST00000419334 FDX1P10109 184 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 ZNF543Q08ER8 600 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 TMEM132BQ14DG7 1078 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 CHST3Q7LGC8 479 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 CCAR1Q8IX12 1150 aaKnown RBP20.69■□□□□ 0.9
EPCAM-203ENST00000419334 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 CHMP4CQ96CF2 233 aa20.69■□□□□ 0.9
EPCAM-203ENST00000419334 PRC1O43663 620 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 IKQ13123 557 aaPredicted RBP20.68■□□□□ 0.9
EPCAM-203ENST00000419334 WTAPQ15007 396 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 GPATCH4Q5T3I0 446 aaKnown RBP20.68■□□□□ 0.9
EPCAM-203ENST00000419334 BTNL9Q6UXG8 535 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 SHCBP1Q8NEM2 672 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 TMEM87BQ96K49 555 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 NEK1Q96PY6 1258 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 MOV10L1Q9BXT6 1211 aaKnown RBP20.68■□□□□ 0.9
EPCAM-203ENST00000419334 USP26Q9BXU7 913 aa20.68■□□□□ 0.9
EPCAM-203ENST00000419334 SLC38A10Q9HBR0 1119 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms