RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 BMP3P12645 472 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 TM4SF4P48230 202 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 USP17L24Q0WX57 530 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 TOB2Q14106 344 aaPredicted RBP24.1■■□□□ 1.45
C4orf48-202ENST00000409860 FAM83BQ5T0W9 1011 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 GPAT2Q6NUI2 795 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 NUP133Q8WUM0 1156 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 TANGO6Q9C0B7 1094 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 NAP1L2Q9ULW6 460 aaPredicted RBP24.1■■□□□ 1.45
C4orf48-202ENST00000409860 SLC45A1Q9Y2W3 748 aa24.1■■□□□ 1.45
C4orf48-202ENST00000409860 ST18O60284 1047 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 SNHG28P0DPA3 235 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 AK2P54819 239 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 APOBRQ0VD83 1088 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 APOA5Q6Q788 366 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 IFNL1Q8IU54 200 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 CHMP4CQ96CF2 233 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 NUP88Q99567 741 aaPredicted RBP24.09■■□□□ 1.45
C4orf48-202ENST00000409860 PTPN18Q99952 460 aa24.09■■□□□ 1.45
C4orf48-202ENST00000409860 ZCCHC17Q9NP64 241 aaKnown RBP24.09■■□□□ 1.45
C4orf48-202ENST00000409860 ZBTB43O43298 467 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 PARP1P09874 1014 aaKnown RBP24.08■■□□□ 1.45
C4orf48-202ENST00000409860 OSBPP22059 807 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 HOXA7P31268 230 aaPredicted RBP24.08■■□□□ 1.45
C4orf48-202ENST00000409860 IRX3P78415 501 aaPredicted RBP24.08■■□□□ 1.45
C4orf48-202ENST00000409860 TROAPQ12815 778 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 ASPRV1Q53RT3 343 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 GPATCH4Q5T3I0 446 aaKnown RBP24.08■■□□□ 1.45
C4orf48-202ENST00000409860 MICU3Q86XE3 530 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 FAM43AQ8N2R8 423 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 MYL10Q9BUA6 226 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 PNMA3Q9UL41 463 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 BRPF3Q9ULD4 1205 aa24.08■■□□□ 1.45
C4orf48-202ENST00000409860 LOC285556D6RIA3 1793 aa24.08■■□□□ 1.44
C4orf48-202ENST00000409860 PTPRFP10586 1907 aa24.08■■□□□ 1.44
C4orf48-202ENST00000409860 GOLGA8BA8MQT2 603 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 PDHXO00330 501 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 IGF2BP3O00425 579 aaKnown RBP eCLIP24.07■■□□□ 1.44
C4orf48-202ENST00000409860 RCAN1P53805 252 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 ZNF543Q08ER8 600 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 GRM4Q14833 912 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 CATSPERGQ6ZRH7 1159 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 KCTD1Q719H9 257 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 RASGRP2Q7LDG7 609 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 CTCFLQ8NI51 663 aaPredicted RBP24.07■■□□□ 1.44
C4orf48-202ENST00000409860 MAP3K14Q99558 947 aa24.07■■□□□ 1.44
C4orf48-202ENST00000409860 FRMPD2Q68DX3 1309 aaPredicted RBP24.07■■□□□ 1.44
C4orf48-202ENST00000409860 ALDH1A1P00352 501 aa24.06■■□□□ 1.44
C4orf48-202ENST00000409860 KIF5BP33176 963 aa24.06■■□□□ 1.44
C4orf48-202ENST00000409860 EVCP57679 992 aa24.06■■□□□ 1.44
C4orf48-202ENST00000409860 IKQ13123 557 aaPredicted RBP24.06■■□□□ 1.44
C4orf48-202ENST00000409860 PARK7Q99497 189 aaKnown RBP24.06■■□□□ 1.44
C4orf48-202ENST00000409860 FEM1BQ9UK73 627 aa24.06■■□□□ 1.44
C4orf48-202ENST00000409860 GOLGA8AA7E2F4 631 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 TMEM232C9JQI7 657 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 FLOT1O75955 427 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 FAM160B2Q86V87 743 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 RAB11FIP4Q86YS3 637 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 GPCPD1Q9NPB8 672 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 THSD7BQ9C0I4 1608 aa24.05■■□□□ 1.44
C4orf48-202ENST00000409860 GOLGA8HP0CJ92 632 aa24.04■■□□□ 1.44
C4orf48-202ENST00000409860 RXRAP19793 462 aa24.04■■□□□ 1.44
C4orf48-202ENST00000409860 METAP2P50579 478 aaKnown RBP eCLIP24.04■■□□□ 1.44
C4orf48-202ENST00000409860 STAT2P52630 851 aa24.04■■□□□ 1.44
C4orf48-202ENST00000409860 NOL8Q76FK4 1167 aaKnown RBP24.04■■□□□ 1.44
C4orf48-202ENST00000409860 CHURC1Q8WUH1 139 aa24.04■■□□□ 1.44
C4orf48-202ENST00000409860 ZNF274Q96GC6 653 aaPredicted RBP24.04■■□□□ 1.44
C4orf48-202ENST00000409860 SLF1Q9BQI6 1058 aa24.04■■□□□ 1.44
C4orf48-202ENST00000409860 LARP6Q9BRS8 491 aaKnown RBP24.04■■□□□ 1.44
C4orf48-202ENST00000409860 ASCC2Q9H1I8 757 aaPredicted RBP24.04■■□□□ 1.44
C4orf48-202ENST00000409860 PLA2G6O60733 806 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 GNAQP50148 359 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 COG2Q14746 738 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 TAF1CQ15572 869 aaPredicted RBP24.03■■□□□ 1.44
C4orf48-202ENST00000409860 RTN1Q16799 776 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 CCDC144CPQ8IYA2 1237 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 DNAJC5GQ8N7S2 189 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 FANCBQ8NB91 859 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 RBM28Q9NW13 759 aaKnown RBP24.03■■□□□ 1.44
C4orf48-202ENST00000409860 MAD2L2Q9UI95 211 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 MYPNQ86TC9 1320 aa24.03■■□□□ 1.44
C4orf48-202ENST00000409860 PALM3A6NDB9 673 aaPredicted RBP24.02■■□□□ 1.44
C4orf48-202ENST00000409860 PDIA3P30101 505 aaKnown RBP24.02■■□□□ 1.44
C4orf48-202ENST00000409860 PPP2R5BQ15173 497 aa24.02■■□□□ 1.44
C4orf48-202ENST00000409860 SAMD1Q6SPF0 538 aaPredicted RBP24.02■■□□□ 1.44
C4orf48-202ENST00000409860 SMCR8Q8TEV9 937 aaPredicted RBP24.02■■□□□ 1.44
C4orf48-202ENST00000409860 GTF3C2Q8WUA4 911 aaPredicted RBP24.02■■□□□ 1.44
C4orf48-202ENST00000409860 FBXO28Q9NVF7 368 aa24.02■■□□□ 1.44
C4orf48-202ENST00000409860 HOXC10Q9NYD6 342 aa24.02■■□□□ 1.44
C4orf48-202ENST00000409860 PPP1R9AQ9ULJ8 1098 aa24.02■■□□□ 1.44
C4orf48-202ENST00000409860 TPCN1Q9ULQ1 816 aa24.02■■□□□ 1.44
C4orf48-202ENST00000409860 CCDC196A0A1B0GTZ2 297 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 KLRF2D3W0D1 207 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 DSG3P32926 999 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 MCM2P49736 904 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 MAP2K1Q02750 393 aaPredicted RBP24.01■■□□□ 1.43
C4orf48-202ENST00000409860 TTBK2Q6IQ55 1244 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 BTNL9Q6UXG8 535 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 STAG2Q8N3U4 1231 aa24.01■■□□□ 1.43
C4orf48-202ENST00000409860 PRPF38AQ8NAV1 312 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms