RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SLC44A5Q8NCS7 719 aa20.24■□□□□ 0.83
CHMP3-203ENST00000409225 GAS2L1Q99501 681 aaPredicted RBP20.24■□□□□ 0.83
CHMP3-203ENST00000409225 TINF2Q9BSI4 451 aa20.24■□□□□ 0.83
CHMP3-203ENST00000409225 C1orf115Q9H7X2 142 aa20.24■□□□□ 0.83
CHMP3-203ENST00000409225 SLC25A27O95847 323 aa20.23■□□□□ 0.83
CHMP3-203ENST00000409225 TMEM179Q6ZVK1 233 aa20.23■□□□□ 0.83
CHMP3-203ENST00000409225 TMEM57Q8N5G2 664 aa20.23■□□□□ 0.83
CHMP3-203ENST00000409225 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHMP3-203ENST00000409225 CRNKL1Q9BZJ0 848 aaKnown RBP20.23■□□□□ 0.83
CHMP3-203ENST00000409225 ARHGEF10LQ9HCE6 1279 aa20.23■□□□□ 0.83
CHMP3-203ENST00000409225 STARD7Q9NQZ5 370 aa20.23■□□□□ 0.83
CHMP3-203ENST00000409225 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
CHMP3-203ENST00000409225 CYP2D6P10635 497 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 AKR1A1P14550 325 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 PBX2P40425 430 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 KCTD2Q14681 263 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 CCDC129Q6ZRS4 1044 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 TOX2Q96NM4 488 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 PRDM12Q9H4Q4 367 aa20.22■□□□□ 0.83
CHMP3-203ENST00000409225 ROBO3Q96MS0 1386 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 GRXCR1A8MXD5 290 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ADAMTS4O75173 837 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 TIMP1P01033 207 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ACLYP53396 1101 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ICA1Q05084 483 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ZNF792Q3KQV3 632 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
CHMP3-203ENST00000409225 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 SDR42E1Q8WUS8 393 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 ATXN2LQ8WWM7 1075 aaKnown RBP20.21■□□□□ 0.83
CHMP3-203ENST00000409225 DYNLL2Q96FJ2 89 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 VCPKMTQ9H867 229 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 THEGQ9P2T0 379 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
CHMP3-203ENST00000409225 TMX2Q9Y320 296 aa20.21■□□□□ 0.83
CHMP3-203ENST00000409225 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
CHMP3-203ENST00000409225 AKR1B1P15121 316 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 NUP133Q8WUM0 1156 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 TSEN34Q9BSV6 310 aaKnown RBP20.2■□□□□ 0.82
CHMP3-203ENST00000409225 PBX4Q9BYU1 374 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 SH2D4AQ9H788 454 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 SYNRGQ9UMZ2 1314 aa20.2■□□□□ 0.82
CHMP3-203ENST00000409225 PDE6AP16499 860 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 PPIGQ13427 754 aaKnown RBP eCLIP20.19■□□□□ 0.827e-11■■□□□ 12.6
CHMP3-203ENST00000409225 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 RIOX2Q8IUF8 465 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 ADAMTS19Q8TE59 1207 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 ASB2Q96Q27 587 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 DCP1AQ9NPI6 582 aaPredicted RBP20.19■□□□□ 0.82
CHMP3-203ENST00000409225 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 DIS3Q9Y2L1 958 aaKnown RBP20.19■□□□□ 0.82
CHMP3-203ENST00000409225 PLXNA1Q9UIW2 1896 aa20.19■□□□□ 0.82
CHMP3-203ENST00000409225 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
CHMP3-203ENST00000409225 PARP14Q460N5 1801 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 STAT3P40763 770 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 CCDC85BQ15834 202 aaPredicted RBP20.18■□□□□ 0.82
CHMP3-203ENST00000409225 KCNA10Q16322 511 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 AKNAD1Q5T1N1 836 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 C16orf59Q7L2K0 433 aa20.18■□□□□ 0.82
CHMP3-203ENST00000409225 MYADML2A6NDP7 307 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 MOXD2PA6NHM9 499 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 CCDC174Q6PII3 467 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 AACSQ86V21 672 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 KLHDC9Q8NEP7 349 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
CHMP3-203ENST00000409225 ZHX1Q9UKY1 873 aaPredicted RBP20.17■□□□□ 0.82
CHMP3-203ENST00000409225 FAM184BQ9ULE4 1060 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 ADAMTS5Q9UNA0 930 aa20.17■□□□□ 0.82
CHMP3-203ENST00000409225 VWA5AO00534 786 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 ACRP10323 421 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 CSF2RAP15509 400 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 IGFBP4P22692 258 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 MRPS5P82675 430 aaKnown RBP20.16■□□□□ 0.82
CHMP3-203ENST00000409225 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 ZNF532Q9HCE3 1301 aa20.16■□□□□ 0.82
CHMP3-203ENST00000409225 MYH8P13535 1937 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 APBB1O00213 710 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 RAD21O60216 631 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 IRX5P78411 483 aaPredicted RBP20.15■□□□□ 0.82
CHMP3-203ENST00000409225 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
CHMP3-203ENST00000409225 RASIP1Q5U651 963 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 CCSAPQ6IQ19 270 aaPredicted RBP20.15■□□□□ 0.82
CHMP3-203ENST00000409225 ZNF365Q70YC5 407 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 VTI1AQ96AJ9 217 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 GLT1D1Q96MS3 346 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 PPP1R12CQ9BZL4 782 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 ARMT1Q9H993 441 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 PPP1R9AQ9ULJ8 1098 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 MROH7Q68CQ1 1323 aa20.15■□□□□ 0.82
CHMP3-203ENST00000409225 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.81
CHMP3-203ENST00000409225 EEF2P13639 858 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms